Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00926 ATGTTACAGCCATGGTCGGAGCCTTTTCTGATCCCTCCTCCGCCATTGTCGTATCCGGCTGGTTTCTTCAACCGGACTGGTCCTTCTCTTCAGTTTGCGTACGATGGTTCGTCAATGGAGCAGCTGAGAATTTTGTCCAACAGTTTTGGGGTCCAAGCTGAGATTGATAAGATGACTGCTCAAGAAATTATGGACGCTAAAGCTCTTGCTGCTTCGAAGAGTCATAGCGAGGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGCTTCGAACTTTACTGCCTAGCACCACCAAGACAGATAAAGCTTCACTACTAGCGGAGGTAATACAACACGTAAAAGAACTAAAGCGACAAACTTCGTTGATCGCCGAAACAAATCTAGTTCCGACTGAAAACGACGAGCTCACAGTCGATGCGTCTGACGATGACGGAAAGTTTGTAATCAGAGCGTCAATTTGCTGTGATGATCGGTCCGATCTTTTGCCCGACCTGATAAAAACCCTAAAATCGCTCCGTTTAAGAACCCTAAAAGCGGAGATCACGACGATGGGAGGAAGAACGAAGAACGTGCTATTTATAACTGGAGACGAAGATTCCAGTGGAGATGGGGAAGAGCAGGAGCAGCTGTGTTGTATAAGCTCAATTCAAGAAGCGCTAAAGGCAGTAATGGAGAAGACAAGAGGGGATGATTCAAATAATCCTTCAACACTTGTTAAGAGGCAAAGGACCAGTAATGTCAATACCCTTTGA 762 45.28 MLQPWSEPFLIPPPPLSYPAGFFNRTGPSLQFAYDGSSMEQLRILSNSFGVQAEIDKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRTLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETNLVPTENDELTVDASDDDGKFVIRASICCDDRSDLLPDLIKTLKSLRLRTLKAEITTMGGRTKNVLFITGDEDSSGDGEEQEQLCCISSIQEALKAVMEKTRGDDSNNPSTLVKRQRTSNVNTL 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14860690 14862389 - Bpe003229.1 Bpe10g00926 110048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00926 253 Pfam Helix-loop-helix DNA-binding domain 73 119 IPR011598 GO:0046983
Bpe10g00926 253 CDD ACT_UUR-ACR-like 155 223 - -
Bpe10g00926 253 PANTHER TRANSCRIPTION FACTOR BHLH30 6 252 - -
Bpe10g00926 253 MobiDBLite consensus disorder prediction 228 253 - -
Bpe10g00926 253 SMART finulus 76 125 IPR011598 GO:0046983
Bpe10g00926 253 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 119 IPR011598 GO:0046983
Bpe10g00926 253 MobiDBLite consensus disorder prediction 232 253 - -
Bpe10g00926 253 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 74 126 IPR036638 GO:0046983
Bpe10g00926 253 PANTHER TRANSCRIPTION FACTOR BHLH30 6 252 IPR045847 GO:0003700|GO:0006355
Bpe10g00926 253 CDD bHLH_AtAIG1_like 65 143 - -
Bpe10g00926 253 Gene3D - 64 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00019 Bpe-Chr2:186149 Bpe10g00926 Bpe-Chr10:14860690 6.67E-46 dispersed
Bpe04g00598 Bpe-Chr4:3813447 Bpe10g00926 Bpe-Chr10:14860690 6.60E-48 dispersed
Bpe04g01748 Bpe-Chr4:23168461 Bpe10g00926 Bpe-Chr10:14860690 4.06E-37 dispersed
Bpe10g00926 Bpe-Chr10:14860690 Bpe13g01328 Bpe-Chr13:18472475 1.97E-118 dispersed
Bpe10g00926 Bpe-Chr10:14860690 Bpe02g02290 Bpe-Chr2:23659959 9.39E-118 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21985 PF00010 HLH 8.90E-13 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00926 - - qsu:112015145 321.242