Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00926 | ATGTTACAGCCATGGTCGGAGCCTTTTCTGATCCCTCCTCCGCCATTGTCGTATCCGGCTGGTTTCTTCAACCGGACTGGTCCTTCTCTTCAGTTTGCGTACGATGGTTCGTCAATGGAGCAGCTGAGAATTTTGTCCAACAGTTTTGGGGTCCAAGCTGAGATTGATAAGATGACTGCTCAAGAAATTATGGACGCTAAAGCTCTTGCTGCTTCGAAGAGTCATAGCGAGGCTGAGAGAAGAAGAAGAGAGAGAATCAATAATCATCTTGCTAAGCTTCGAACTTTACTGCCTAGCACCACCAAGACAGATAAAGCTTCACTACTAGCGGAGGTAATACAACACGTAAAAGAACTAAAGCGACAAACTTCGTTGATCGCCGAAACAAATCTAGTTCCGACTGAAAACGACGAGCTCACAGTCGATGCGTCTGACGATGACGGAAAGTTTGTAATCAGAGCGTCAATTTGCTGTGATGATCGGTCCGATCTTTTGCCCGACCTGATAAAAACCCTAAAATCGCTCCGTTTAAGAACCCTAAAAGCGGAGATCACGACGATGGGAGGAAGAACGAAGAACGTGCTATTTATAACTGGAGACGAAGATTCCAGTGGAGATGGGGAAGAGCAGGAGCAGCTGTGTTGTATAAGCTCAATTCAAGAAGCGCTAAAGGCAGTAATGGAGAAGACAAGAGGGGATGATTCAAATAATCCTTCAACACTTGTTAAGAGGCAAAGGACCAGTAATGTCAATACCCTTTGA | 762 | 45.28 | MLQPWSEPFLIPPPPLSYPAGFFNRTGPSLQFAYDGSSMEQLRILSNSFGVQAEIDKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRTLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETNLVPTENDELTVDASDDDGKFVIRASICCDDRSDLLPDLIKTLKSLRLRTLKAEITTMGGRTKNVLFITGDEDSSGDGEEQEQLCCISSIQEALKAVMEKTRGDDSNNPSTLVKRQRTSNVNTL | 253 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 14860690 | 14862389 | - | Bpe003229.1 | Bpe10g00926 | 110048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00926 | 253 | Pfam | Helix-loop-helix DNA-binding domain | 73 | 119 | IPR011598 | GO:0046983 | |
Bpe10g00926 | 253 | CDD | ACT_UUR-ACR-like | 155 | 223 | - | - | |
Bpe10g00926 | 253 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 6 | 252 | - | - | |
Bpe10g00926 | 253 | MobiDBLite | consensus disorder prediction | 228 | 253 | - | - | |
Bpe10g00926 | 253 | SMART | finulus | 76 | 125 | IPR011598 | GO:0046983 | |
Bpe10g00926 | 253 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 70 | 119 | IPR011598 | GO:0046983 | |
Bpe10g00926 | 253 | MobiDBLite | consensus disorder prediction | 232 | 253 | - | - | |
Bpe10g00926 | 253 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 74 | 126 | IPR036638 | GO:0046983 | |
Bpe10g00926 | 253 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 6 | 252 | IPR045847 | GO:0003700|GO:0006355 | |
Bpe10g00926 | 253 | CDD | bHLH_AtAIG1_like | 65 | 143 | - | - | |
Bpe10g00926 | 253 | Gene3D | - | 64 | 129 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g00019 | Bpe-Chr2:186149 | Bpe10g00926 | Bpe-Chr10:14860690 | 6.67E-46 | dispersed | |
Bpe04g00598 | Bpe-Chr4:3813447 | Bpe10g00926 | Bpe-Chr10:14860690 | 6.60E-48 | dispersed | |
Bpe04g01748 | Bpe-Chr4:23168461 | Bpe10g00926 | Bpe-Chr10:14860690 | 4.06E-37 | dispersed | |
Bpe10g00926 | Bpe-Chr10:14860690 | Bpe13g01328 | Bpe-Chr13:18472475 | 1.97E-118 | dispersed | |
Bpe10g00926 | Bpe-Chr10:14860690 | Bpe02g02290 | Bpe-Chr2:23659959 | 9.39E-118 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21985 | PF00010 | HLH | 8.90E-13 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00926 | - | - | qsu:112015145 | 321.242 |