Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00943 ATGGCGGATAACAGCCAACAGACTGATACCTCCACTGATATTGAAAACGATGACAGAAACCAGTTTCAAGCCCATCATGGAGCAGTTGCTAATGTGGATTCCTTGGATCAATCTAAGGCAAAAGCTGGTGACCAAAAGACTCTTCGTCGGCTCGCACAAAATCGTGAAGCAGCAAGGAAGAGTCGATTGAGGAAAAAGGCATATGTCCAGCAGCTGGAAACCAGTCAAGTTAAGCTTGCACAACTCGAGCAAGAGCTTCAACGTGCTCGCCAACAAGCAATGTTTACTTCAAATGGTTTTTCCGGAGACCATGCTCCTTCTATTTCCAGCAATGTTCCATCAGGTGCATTGGCATTTGATGTGGACTATGCAAGATGGCTTGAAGACCACCAGAGGCTCATCAACGATCTTAGATCGGCCGTTAATTCTCACATGGGCGACAACGAATTGCGATTTCTAGTCGATAGTATAATGACACATTACGATGAGTTATTCAGATTGAAGAGCATAGGCTCCAAACATGACGTATTTTACATGCTTTCCGGCATGTGGAAAACCCCGGCAGAGCGGTGTTTCATGTGGTTGGGTGGATTCCGATCGTCCGATCTTCTCAAGATTATTGGAAATCATCTCGAGCCTCTAACAGATCAACAGCTGATGGGAATATGTAATCTTCAGCAGTCTTCTCAGCAGGCAGAGGATGCCTTGTCACAAGGAATGGAAGCTTTGCAACAATCTCTTTTGGAAACGCTCACGGATTCGACCTCTCTCAGCCTGCCCGGGTCGGGAAATGTTGCTGACTACATGGGTCAAATGGTCATAGCAATGGAAAAGCTTGCCATCCTTGAGAACTTCATCCACCAGGCTGATCTTTTGAGGCAGCAAACCTTACAGCAGATGCATCGAATCCTAACGCCACGACAAGCAGCTCGAGGCCTTATGTGTATAAGTGATTACAACTCGCGGCTTCGAGCTCTCAGTTCCTTATGGTTAGCACGGCCAAGAGACCTGAACTGA 1017 46.71 MADNSQQTDTSTDIENDDRNQFQAHHGAVANVDSLDQSKAKAGDQKTLRRLAQNREAARKSRLRKKAYVQQLETSQVKLAQLEQELQRARQQAMFTSNGFSGDHAPSISSNVPSGALAFDVDYARWLEDHQRLINDLRSAVNSHMGDNELRFLVDSIMTHYDELFRLKSIGSKHDVFYMLSGMWKTPAERCFMWLGGFRSSDLLKIIGNHLEPLTDQQLMGICNLQQSSQQAEDALSQGMEALQQSLLETLTDSTSLSLPGSGNVADYMGQMVIAMEKLAILENFIHQADLLRQQTLQQMHRILTPRQAARGLMCISDYNSRLRALSSLWLARPRDLN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 14979149 14981356 - Bpe003248.1 Bpe10g00943 110065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00943 338 PANTHER TRANSCRIPTION FACTOR TGA9 1 336 - -
Bpe10g00943 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 44 88 IPR004827 GO:0003700|GO:0006355
Bpe10g00943 338 Coils Coil 65 99 - -
Bpe10g00943 338 ProSiteProfiles DOG1 domain profile. 116 333 IPR025422 GO:0006351|GO:0043565
Bpe10g00943 338 MobiDBLite consensus disorder prediction 1 48 - -
Bpe10g00943 338 SUPERFAMILY Leucine zipper domain 46 90 IPR046347 GO:0003700|GO:0006355
Bpe10g00943 338 SMART brlzneu 42 99 IPR004827 GO:0003700|GO:0006355
Bpe10g00943 338 Pfam Seed dormancy control 134 207 IPR025422 GO:0006351|GO:0043565
Bpe10g00943 338 Gene3D - 45 98 - -
Bpe10g00943 338 Pfam bZIP transcription factor 46 85 IPR004827 GO:0003700|GO:0006355
Bpe10g00943 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 49 64 IPR004827 GO:0003700|GO:0006355
Bpe10g00943 338 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 1 336 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g02277 Bpe10g00943 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02277 Bpe-Chr2:23591628 Bpe10g00943 Bpe-Chr10:14979149 2.09E-96 dispersed
Bpe10g00943 Bpe-Chr10:14979149 Bpe15g00992 Bpe-Chr15:19459390 9.71E-155 dispersed
Bpe11g01133 Bpe-Chr11:8448348 Bpe10g00943 Bpe-Chr10:14979149 1.32E-10 dispersed
Bpe10g00943 Bpe-Chr10:14979149 Bpe04g01381 Bpe-Chr4:20448925 9.41E-156 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21988 PF14144 DOG1 1.60E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00943 K14431 - vvi:100249239 503.442