Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe10g00947 | ATGGACGGAAGTTGCACCGATGAAAGCACGGAGAGTGAATCCACCTCTATCTCTCCGGTGACTCCACTGGCTTTTCCGGTTGCTAAGTGCTCTTCCCCGCCTGAGGGTCGGTACCGTATGGGTGGCGGAACGTGTGTCGTTGTCGACTCCGATCAGTCGTGCGGTGTGGAAGCAGAGTCAAGAAAGCTCCCCTCCTCCAGGTTCAAAGGTGTGGTGCCGCAGCCCAATGGCCGGTGGGGGGCGCAGATTTATGAAAAGCACCAACGGGTCTGGCTCGGCACTTTTAACGAGGAGGACGAGGCAGCCCGAGCGTATGATGTCGCCGCTCAACGATTCCGCGGCCGCGATGCTGTCACCAATTTCAAGCCGCTTGCCGACACTGCCGACGACGACGTCGAGTTGGAGTTTCTCAATTCCCATTCGAAATCCGAGATCGTTGATATGCTACGTAAGCATACCTACAGCGATGAACTGCAGCAGAGCAAACGAAGAAATGGGTTACTAAACGGCCATGGCAATCGAACAAGAGCCGTTGGCCTAACCGGCGCCGGACAGGACAATGATTCCAAGGAACGTGAGCTGCTTTTCGAAAAGGGGGTGACCCCTAGCGACGTCGGAAAATTGAACCGTCTAGTGATCCCCAAGCAATATGCCGAGAAGCACTTCCCGTTGCAGAGCGGCGCCGCCTCATCCAAAGGCATCCTTCTCAACTTCGAGGACGTTGGAGGAAAAGTATGGCGGTTCCGCTACTCGTATTGGAACAGCAGCCAAAGCTACGTTCTAACAAAAGGATGGAGCCGATTCGTAAAGGAGAAGAACCTCCATGCCGGAGACATCGTCAGCTTCCTCCGATCTACCGGACCGGAGAAACAGCTGTACATTGACTTCAAGGATCGGAATGGACGGGCGGTGGCGGCGGGATTTTCGAACCCAAAGCCACCGGTTCAGATAGTGAGACTATTTGGGGTGAATATTTTCAAAGTACCTGGAAATGGTATTGGTAGTGCAGATAGCGCCGCCTCAACGGGTGGCTGCCATGGGAAGAGAATAAGAGATCAAGTAGAGCTTTTAGGTTTAGAGTACAGTAAAAAGCAAAGGGTAATCGGAGCTCTGTAA | 1116 | 53.49 | MDGSCTDESTESESTSISPVTPLAFPVAKCSSPPEGRYRMGGGTCVVVDSDQSCGVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAQRFRGRDAVTNFKPLADTADDDVELEFLNSHSKSEIVDMLRKHTYSDELQQSKRRNGLLNGHGNRTRAVGLTGAGQDNDSKERELLFEKGVTPSDVGKLNRLVIPKQYAEKHFPLQSGAASSKGILLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLHAGDIVSFLRSTGPEKQLYIDFKDRNGRAVAAGFSNPKPPVQIVRLFGVNIFKVPGNGIGSADSAASTGGCHGKRIRDQVELLGLEYSKKQRVIGAL | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 15006814 | 15007929 | + | Bpe003252.1 | Bpe10g00947 | 110069 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe10g00947 | 371 | Pfam | B3 DNA binding domain | 196 | 298 | IPR003340 | GO:0003677 | |
Bpe10g00947 | 371 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 1 | 371 | IPR044800 | GO:0003700 | |
Bpe10g00947 | 371 | Pfam | AP2 domain | 67 | 114 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00947 | 371 | Gene3D | - | 184 | 307 | IPR015300 | - | |
Bpe10g00947 | 371 | SMART | rav1_2 | 67 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00947 | 371 | SUPERFAMILY | DNA-binding pseudobarrel domain | 193 | 298 | IPR015300 | - | |
Bpe10g00947 | 371 | SMART | B3_2 | 196 | 300 | IPR003340 | GO:0003677 | |
Bpe10g00947 | 371 | Gene3D | AP2/ERF domain | 66 | 123 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe10g00947 | 371 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Bpe10g00947 | 371 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bpe10g00947 | 371 | CDD | AP2 | 66 | 121 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00947 | 371 | ProSiteProfiles | B3 DNA-binding domain profile. | 196 | 300 | IPR003340 | GO:0003677 | |
Bpe10g00947 | 371 | CDD | B3_DNA | 195 | 282 | IPR003340 | GO:0003677 | |
Bpe10g00947 | 371 | MobiDBLite | consensus disorder prediction | 165 | 186 | - | - | |
Bpe10g00947 | 371 | ProSiteProfiles | AP2/ERF domain profile. | 67 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe10g00947 | 371 | SUPERFAMILY | DNA-binding domain | 66 | 122 | IPR016177 | GO:0003677 | |
Bpe10g00947 | 371 | PANTHER | PROTEIN RAV1, PUTATIVE-RELATED | 1 | 371 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe02g02282 | Bpe10g00947 | CCT | |
Bpe10g00947 | Bpe11g01690 | CCT | |
Bpe10g00947 | Bpe11g01690 | ECH | |
Bpe02g02282 | Bpe10g00947 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe02g02282 | Bpe-Chr2:23612580 | Bpe10g00947 | Bpe-Chr10:15006814 | 3.73E-146 | dispersed | |
Bpe08g01418 | Bpe-Chr8:14981731 | Bpe10g00947 | Bpe-Chr10:15006814 | 5.45E-14 | dispersed | |
Bpe10g00947 | Bpe-Chr10:15006814 | Bpe11g00900 | Bpe-Chr11:6679200 | 8.97E-54 | dispersed | |
Bpe10g00947 | Bpe-Chr10:15006814 | Bpe11g01690 | Bpe-Chr11:13188925 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21989 | PF02362 | B3 | 2.30E-27 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe10g00947 | K09287 | - | pvy:116107511 | 478.789 |