Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00974 ATGTTTCTTGGGGACTTCTGGCTTGTCTTCCTCTTTTTCGGAGTCTGCTTCGAAGCTCAGCTCTTGCATTCTCGAAACCTAACCTGCAATTCAGATGATTTGCAGGCATTGGAAGATTTCTTCGAGGGTATGGACTCTAAAATTAACGGCTGGGGCACTAACGTTTCGACTGATTGCTGCGTCTGGCCTGGAGTCACTTGCAATTTTTCGTCAACTATGGGGGTTAACGTTACTTTAGAGACTGGTAGAGTTGTGAAGATCGACCTTGGTGGAAAGAAGCTAACGGGGAAACTTTCTGACTCTATTGGCCGGCTGGAGCAGCTTGAACATCTCAATCTCTCTCAAAATTTTCTAAAGAGTTCGCTTCCTTCTTCGTTGTTCCAGCTGCCTAAATTGGAGGTACTCGACCTAAGTTCCAATGATTTAACTGGCGTTATTCCGGCGACCTTGAATCTACCTGCGATCCAGCTGCTTGATTTGTCTCAGAACTACTTGAATGGCTCTCTCCCACCTTATTTATGCCACAACTCTTCCAGAATTAGGGTGTTGGATCTTGGCTTCAACTATTTCTCCGGCAGTTTCCCTCCGGGAATTGGCAACTGCACCTTCTTAGAAACCTTCTCTCTGGAGACTAATGACCTCACGGGCAACATTCCCGACTATATATTCGGGCTGCAAAAATTGACCTTGTTGAGCCTCCGAGACAACCTGTTTTCAGGACAGCTGAACGAGCTGATTGGTAATCTCCCAAACCTTGTTCGCCTGGATATTGCTTACAATAGATTTTCAGGAGAAATTCCAGATGTATTTTACACCTCCAAAAATTTGCAGTTCTTAGTGTTCGAATCAAACAATTTCACTGGTCCAATACCGAATTCGTTATCTAGTTCTCCAACGATAAATCTCCTAAACTTGAGGAACAATTCTTTAACGGGTCCCATCAATATTAACTGTTCAGCCATGGCTAACCTGACCTCTCTTGATTTGGGAACTAATTGGTTTTACGGTCCCGTTCCGAGCAATCTTCCGGCTTGTCGGCGCCTAAAAAACATAAATCTAGCCCGAAATAACTTCACCGGAGATATCCCTGAAACCTTCAAGAATTTTCAGAGCCTTTCTTATCTTTCACTGTCCAATTCAAGCATAGTCAATCTCCACTCTGCACTTGACATCTTGCAGCACTGCAAGAACTTGAGCACTTTAGTCCTTACCCTGAACTTCCATGATGAAGAGCTGCCTTCTGATCGTACACTTAATTTCGAAAACCTCAAGGTTTTGATTATAGCCAGTTGTAGACTAAAGGGTGTAATGCCAGAATGGTTGAGGCGGAGTTCAAAATTGCAGTTGTTGGATTTGTCATGGAACAGACTGGGCGGATCGATTCCGGACTGGTTTGGTGATTTTCAGCTTCTTTTTTACTTGGATTTATCGAACAATTCATTTACAGGAGAGATTCCAATAACCATAACTAGATTGCCGAGCCTTATTATTTTGAGTTTCCCTCCCACCCTGGAGCTTAGCAACAACAATCTGAGTGGACCAATCTGGCTGGATTTTGGGAAACTGAGAAAGCTCAGTGTCTTGGATCTGAAATTCAATAATCTTTCAGGAGAAATTCCGAGCTCTTTATCAGGGATGGCTAGCCTGGAGACTTTGGATTTGTCGCATAATAAGCTTACTGGAACAATACCACAATCATTAGTGAGTCTGAGTTTCTTGTCTAAGTTCAGTGTTGCTTACAATCAGTTAAGTGGGGTAATTCCTTCCGGTGGTCAATTTCAAACCTTCCCTAATTCAAGCTTTGAAGGAAATAATCTCTGTGGCGAACATGCTTCTCCTTGTCCGACAAATGATCAAAGCTCATTTACATCACCTGGAAGATCAAGATGGAGCCAAGGAAGTATCATTGGTATGGCCGTCGGGATTTCGTTTGGAACTGCTTTCCTTCTTGTTCTGCTGATTCTGATTGGACTTCGGACTCATAGCAGAAGAAATGTAGATCTCGAAAGAGAGGTGGCTAACTCTAATGATAAGGATTTAGTAGAACTTGGATCAAAACTGGTAGTTTTGTTCCAAAACAAGGAGAACAATAAAGGACTCACCATAGACGATCTTTTGAAATTAACCGACAATTTCGACCAGGCAAACATAATCGGGTGCGGGGGTTTTGGCCTTGTTTACAGAGCCACCCTTCTTGATGGTAGGAGAGTTGCGATCAAGCGGCTCTCGGGCGATTGCGGACAGATAGAAAGAGAGTTTCGTGCAGAAGTTGAAACTCTCTCCAGAGCTCAGCATCCTAATCTTGTTCTTCTTCAGGGATATTGCATTTATAGAAATGACAGGCTTTTGATATATTCTTACATGGAGAATGGCAGTTTGGATTATTGGTTGCACGAAAAATTTGATGGCCCTTCTTGTCTAAGTTGGGAGATGAGGCTCCGAATTGCTCAAGGGGCTGCAAGGGGACTAGCTTACTTACACCAATCATGTGAGCCGCATATCCTTCATCGAGACATCAAATCGAGCAACATCCTTTTAGACGAGAGTTTCACAGCCCATTTGGCCGATTTTGGTCTCGCTAGGCTCATACTTCCTCACGATACACACGTGACGACTGATCTAGTCGGGACTTTAGGGTACATTCCGCCTGAGTATGGGCAATCCTCGGTTGCTACTTACAAGGGAGATGTCTATAGTTTTGGAGTCGTTCTGTTGGAACTTTTGACCGGAAAAAGGCCGATGGATATATGCAAGCCTAAAGAATGTCGGGATTTAATCTCTTGGGTGTTCCAGATGAAGAAGGAAGGCAAGGAAACCGAAGTTTATGATCCTTTCATTTACGAAAAGCATCGCGGCAAGCAAATGTCGCGGATTCTTGAAATAGCATGTCTTTGTCTGAACGAATATCCAAAAAGTCGCCCTTCGACCCAGCAGCTAGTTTCTTGGCTTGACAACATCATCTAG 2964 43.59 MFLGDFWLVFLFFGVCFEAQLLHSRNLTCNSDDLQALEDFFEGMDSKINGWGTNVSTDCCVWPGVTCNFSSTMGVNVTLETGRVVKIDLGGKKLTGKLSDSIGRLEQLEHLNLSQNFLKSSLPSSLFQLPKLEVLDLSSNDLTGVIPATLNLPAIQLLDLSQNYLNGSLPPYLCHNSSRIRVLDLGFNYFSGSFPPGIGNCTFLETFSLETNDLTGNIPDYIFGLQKLTLLSLRDNLFSGQLNELIGNLPNLVRLDIAYNRFSGEIPDVFYTSKNLQFLVFESNNFTGPIPNSLSSSPTINLLNLRNNSLTGPININCSAMANLTSLDLGTNWFYGPVPSNLPACRRLKNINLARNNFTGDIPETFKNFQSLSYLSLSNSSIVNLHSALDILQHCKNLSTLVLTLNFHDEELPSDRTLNFENLKVLIIASCRLKGVMPEWLRRSSKLQLLDLSWNRLGGSIPDWFGDFQLLFYLDLSNNSFTGEIPITITRLPSLIILSFPPTLELSNNNLSGPIWLDFGKLRKLSVLDLKFNNLSGEIPSSLSGMASLETLDLSHNKLTGTIPQSLVSLSFLSKFSVAYNQLSGVIPSGGQFQTFPNSSFEGNNLCGEHASPCPTNDQSSFTSPGRSRWSQGSIIGMAVGISFGTAFLLVLLILIGLRTHSRRNVDLEREVANSNDKDLVELGSKLVVLFQNKENNKGLTIDDLLKLTDNFDQANIIGCGGFGLVYRATLLDGRRVAIKRLSGDCGQIEREFRAEVETLSRAQHPNLVLLQGYCIYRNDRLLIYSYMENGSLDYWLHEKFDGPSCLSWEMRLRIAQGAARGLAYLHQSCEPHILHRDIKSSNILLDESFTAHLADFGLARLILPHDTHVTTDLVGTLGYIPPEYGQSSVATYKGDVYSFGVVLLELLTGKRPMDICKPKECRDLISWVFQMKKEGKETEVYDPFIYEKHRGKQMSRILEIACLCLNEYPKSRPSTQQLVSWLDNII 987
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15211628 15214678 + Bpe003278.1 Bpe10g00974 110096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00974 987 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Bpe10g00974 987 SMART serkin_6 712 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00974 987 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Bpe10g00974 987 Gene3D Transferase(Phosphotransferase) domain 1 788 986 - -
Bpe10g00974 987 Gene3D Phosphorylase Kinase; domain 1 674 787 - -
Bpe10g00974 987 CDD STKc_IRAK 718 986 - -
Bpe10g00974 987 Coils Coil 658 678 - -
Bpe10g00974 987 SUPERFAMILY L domain-like 319 613 - -
Bpe10g00974 987 ProSitePatterns Protein kinases ATP-binding region signature. 718 740 IPR017441 GO:0005524
Bpe10g00974 987 PANTHER RECEPTOR-LIKE PROTEIN 55 142 206 - -
Bpe10g00974 987 PANTHER RECEPTOR-LIKE PROTEIN 55 180 986 - -
Bpe10g00974 987 PANTHER RECEPTOR-LIKE PROTEIN 55 82 174 - -
Bpe10g00974 987 PRINTS Leucine-rich repeat signature 132 145 - -
Bpe10g00974 987 PRINTS Leucine-rich repeat signature 546 559 - -
Bpe10g00974 987 SUPERFAMILY Protein kinase-like (PK-like) 696 983 IPR011009 -
Bpe10g00974 987 PANTHER TYROSINE-SULFATED GLYCOPEPTIDE RECEPTOR 1 142 206 - -
Bpe10g00974 987 ProSiteProfiles Protein kinase domain profile. 712 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe10g00974 987 Gene3D Ribonuclease Inhibitor 318 618 IPR032675 -
Bpe10g00974 987 SMART LRR_typ_2 546 570 IPR003591 -
Bpe10g00974 987 SMART LRR_typ_2 152 176 IPR003591 -
Bpe10g00974 987 SMART LRR_typ_2 522 545 IPR003591 -
Bpe10g00974 987 SMART LRR_typ_2 249 273 IPR003591 -
Bpe10g00974 987 SMART LRR_typ_2 321 345 IPR003591 -
Bpe10g00974 987 SMART LRR_typ_2 105 129 IPR003591 -
Bpe10g00974 987 SUPERFAMILY L domain-like 54 406 - -
Bpe10g00974 987 PANTHER TYROSINE-SULFATED GLYCOPEPTIDE RECEPTOR 1 180 986 - -
Bpe10g00974 987 PANTHER TYROSINE-SULFATED GLYCOPEPTIDE RECEPTOR 1 82 174 - -
Bpe10g00974 987 PANTHER TYROSINE-SULFATED GLYCOPEPTIDE RECEPTOR 1 13 72 - -
Bpe10g00974 987 Gene3D Ribonuclease Inhibitor 30 317 IPR032675 -
Bpe10g00974 987 ProSiteProfiles Leucine-rich repeat profile. 548 571 IPR001611 GO:0005515
Bpe10g00974 987 Pfam Leucine rich repeat 523 583 IPR001611 GO:0005515
Bpe10g00974 987 Pfam Leucine rich repeat 422 480 IPR001611 GO:0005515
Bpe10g00974 987 Pfam Leucine rich repeat 86 142 IPR001611 GO:0005515
Bpe10g00974 987 PANTHER RECEPTOR-LIKE PROTEIN 55 13 72 - -
Bpe10g00974 987 Pfam Protein kinase domain 714 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00581 Bpe-Chr10:12775008 Bpe10g00974 Bpe-Chr10:15211628 2.98E-06 dispersed
Bpe10g00974 Bpe-Chr10:15211628 Bpe03g00294 Bpe-Chr3:3991704 3.20E-21 dispersed
Bpe09g00240 Bpe-Chr9:1740675 Bpe10g00974 Bpe-Chr10:15211628 4.34E-11 transposed
Bpe09g00480 Bpe-Chr9:13214635 Bpe10g00974 Bpe-Chr10:15211628 5.55E-07 transposed
Bpe10g00974 Bpe-Chr10:15211628 Bpe11g01618 Bpe-Chr11:12318423 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63552 PF00069 Pkinase 2.10E-43 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00974 - - jre:109006276 1330.85