Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00979 ATGGCGGCTTCTTCTGAGTCATTGAAGAACACCCAGAAGGAAGGTGATGAAATGACTGTTCTTCAGAGACACATCGCATTCTTCGATAGAAATCACGACGGCGTCGTCTACCCGTGGGAGACTTTTCAAGGATTTCGAGCTGTAGGATGTGGATTCTTGTTGTCTGTGGCTGGTGGAATTCTCGTAAATATGGCTCTCAGCCACAGCACTCGACCTGGAAAGTTTCCTTCTCTTCTATTCCCGGTCGTGATTAAAAATGCTCATAAAGCCAAACATAGGAGCGATACTGGTACATTCAACACCGAAGGAAGGTTTGATCCGTCTAAATTCGAGGCGATTTTCACAAAAAATGCAAAAACTCACCCAAATGCGTTGACATCAGAAGAACTAAGTGGAATGTTAAAGACAAATCGAGAAAGCACGGACCGTAATGGATGGATTATGAGCTATACTGAATGGAAGCTTTTGTTCGAGCTTGGGAAAGACAAAGATGGGTTGCTGCAGAAGGAAACCCTAATGGCTTTCTATGATGGAAGCTTGTTTGAGAAATTGGAGAGAGAGAGGGATTGCCACGCGTCCACACGCTTCCGCCATTGTTCCTATAAGAACACCCTTGAAGCAGTTCGCTTGGCCTGCAAGGAAAACCTTTTCTTTTCAGATTTTACCCAAAAGAAAGAGAGGTCGAAGACTACACAAACAAGATCCACTCCTCGATTTCGTGTCAATGGCGTTGGAATGGGTCGTCCTAGGCTATGCCGCCGGTGCCGAGGCGATTATGGTTCTCCTCCTGACGATTCCCGGATTAGATGGGCTACGGAAAGGATTGCTCGCGGTCACTCGGAATCTGCTGAAACCCCTCCTCTCGGTTGTTCCCTTTTGTCTGTTTTTGCTGATGGATATTTACTGGAAGTACGAGAATCGTCCGAGTTGCGAGGCCGAGTCGTGCACCCCCTCTGA 957 47.02 MAASSESLKNTQKEGDEMTVLQRHIAFFDRNHDGVVYPWETFQGFRAVGCGFLLSVAGGILVNMALSHSTRPGKFPSLLFPVVIKNAHKAKHRSDTGTFNTEGRFDPSKFEAIFTKNAKTHPNALTSEELSGMLKTNRESTDRNGWIMSYTEWKLLFELGKDKDGLLQKETLMAFYDGSLFEKLERERDCHASTRFRHCSYKNTLEAVRLACKENLFFSDFTQKKERSKTTQTRSTPRFRVNGVGMGRPRLCRRCRGDYGSPPDDSRIRWATERIARGHSESAETPPLGCSLLSVFADGYLLEVRESSELRGRVVHPL 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15239721 15242058 + Bpe024725 Bpe10g00979 110101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00979 318 Pfam Caleosin related protein 17 184 IPR007736 -
Bpe10g00979 318 PANTHER PEROXYGENASE 3-RELATED 9 190 IPR007736 -
Bpe10g00979 318 PANTHER INACTIVE PEROXYGENASE-LIKE PROTEIN-RELATED 9 190 - -
Bpe10g00979 318 SUPERFAMILY EF-hand 19 176 IPR011992 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g01974 Bpe10g00979 CCT
Bpe10g00979 Bpe13g01012 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00979 Bpe-Chr10:15239721 Bpe13g01012 Bpe-Chr13:15867534 4.56E-80 dispersed
Bpe10g00979 Bpe-Chr10:15239721 Bpe02g01974 Bpe-Chr2:21585708 2.67E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00979 K17991 - cit:102625577 253.062