Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00981 ATGGACGTGAGATCGTTTGGCGATAAGCGAGCCAAGCTGGCCTGGATCGATTGTTTGGAGCTCTATGAAGACACCGTCGATAAGCTCAACAAATCGATGGGCTCCATTAGTGTTTTTGACCATCTAACGTGGTTAAGTGCTTCAATCACTAATCATCAAACTTGTCAAAATGGGTTTAAGGAATTCAACCTATCTTCTTATCTCGATTCATTTCCTCCCATTTTAACCACCTTCTTTAAGATCCTCAGCAATTCTCTTGCCTTAGCCAAGGCCTCTTCACTATCTTCTTCTTCTTCTTCCTCCTCGTCCACAGCTTTTGCATTTACTCGACAAAAGTTTGGCCGGAGGTTGCTCTCCGACGGCTTTCCCGACTGGCTTTCGGCCGGTGATCGACGGCTTCTCGAATCCTCCGGAGAAAAAAAAGGTGATGTCGTTGTTGCCCAAGATGGGTCGGGAAATTATGAATCCATTATGCAGGCTGTAAATTCAGCAGGAAAGAGAGGAGGATCAAGATTTATCATTTATGTGAAATCCGGTGTTTATAAAGAAAATGTGGTGATCAAGAAGACGATAAAAAATATTATGATTATTGGAGATGGAACTGATTCCACCATTGTTAGAGCCGACGACAACGCTGAAGATGGGTCTACCACTTTTCGTTCTGCCACCATTGGAATCTCAGGAGATGGATTCATAGCACAAGACATAACCTTTGAGAACACCGCCGGACCCCAAAAACACCAGGCGGTGGCCGTCCGGTCAAGCTCCGACCACTCCGTCTTCTACCGGTGCAGCATCAAGGGCTACCAAGATACCCTCTACGTGTACTCGCAGCGGCAATTCTACCGAGACTGCGACATTTATGGGACCATCGACTTCATTTTTGGAGACGCCGTCGCTGTCATCCAAAACTGTAACATCTACGTAAGAAAACCGATGGGGAACCAGCAAAATACGGTCACAGCTCAAGGGAGAACCGACCCAAATGAGAACACAGGAATCATAATCCATAACTCACGTATAACCGCTTCGTCGGACCTCCGATCGTCGCAAAATTCTTTCAAAACTTTTCTTGGCCGGCCATGGCAAAAATACTCGAGGACTGTAATTATGAAAACAGTAATCGACGGTTTGATCGATCCGGCGGGGTGGGCACCGTGGAGTGGGAGTTTCGCATTGAGTACTCTTTACTATGGCGAGTACATGAATACTGGGAGCGGGGCTACAACTGGGCGGAGAGTGAAATGGGGAGGGTTTAGGGTTATAACGAGTCCGCTGGAGGCCGGAAAGTTCACAGTAGGGAACTTTCTGGCAGGTGGGTCGTGGATTCCGGCAACCGGAGTTCCGTTCGCGGCGGGTTTATGA 1365 47.69 MDVRSFGDKRAKLAWIDCLELYEDTVDKLNKSMGSISVFDHLTWLSASITNHQTCQNGFKEFNLSSYLDSFPPILTTFFKILSNSLALAKASSLSSSSSSSSSTAFAFTRQKFGRRLLSDGFPDWLSAGDRRLLESSGEKKGDVVVAQDGSGNYESIMQAVNSAGKRGGSRFIIYVKSGVYKENVVIKKTIKNIMIIGDGTDSTIVRADDNAEDGSTTFRSATIGISGDGFIAQDITFENTAGPQKHQAVAVRSSSDHSVFYRCSIKGYQDTLYVYSQRQFYRDCDIYGTIDFIFGDAVAVIQNCNIYVRKPMGNQQNTVTAQGRTDPNENTGIIIHNSRITASSDLRSSQNSFKTFLGRPWQKYSRTVIMKTVIDGLIDPAGWAPWSGSFALSTLYYGEYMNTGSGATTGRRVKWGGFRVITSPLEAGKFTVGNFLAGGSWIPATGVPFAAGL 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15252538 15254262 + Bpe003286.1 Bpe10g00981 110103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00981 454 ProSitePatterns Pectinesterase signature 1. 168 187 IPR018040 -
Bpe10g00981 454 PANTHER PECTINESTERASE 1 453 - -
Bpe10g00981 454 Pfam Plant invertase/pectin methylesterase inhibitor 13 88 IPR006501 GO:0004857
Bpe10g00981 454 CDD PMEI-like_3 8 65 - -
Bpe10g00981 454 Pfam Pectinesterase 143 439 IPR000070 GO:0030599|GO:0042545
Bpe10g00981 454 Gene3D Invertase/pectin methylesterase inhibitor family protein 3 91 IPR035513 -
Bpe10g00981 454 SUPERFAMILY Pectin lyase-like 142 453 IPR011050 -
Bpe10g00981 454 Gene3D - 138 454 IPR012334 -
Bpe10g00981 454 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 4 90 IPR035513 -
Bpe10g00981 454 SMART PMEI_2 2 88 IPR006501 GO:0004857
Bpe10g00981 454 ProSitePatterns Pectinesterase signature 2. 287 296 IPR033131 -
Bpe10g00981 454 PANTHER PECTINESTERASE INHIBITOR 5-RELATED 1 453 - -
Bpe10g00981 454 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 90 IPR006501 GO:0004857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00981 Bpe-Chr10:15252538 Bpe14g00892 Bpe-Chr14:6662463 3.28E-171 dispersed
Bpe10g00981 Bpe-Chr10:15252538 Bpe03g00695 Bpe-Chr3:27078457 3.76E-153 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00981 - - zju:107429290 633.254