Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00983 ATGGAAACTTTTCAAGGCCTTCTCAAAATTAGGGTTCAAAGAGGAGTTAATCTGGCTGTTCGTGATGTTCGAACTCGCACCAGTGATCCATACGTCTTTATTGAATTTAACCATAAACAATTGCAGAGATTGACGACTCGGGTGGTGAAGAAGAACTGCAATCCCGTTTGGAATGAGGATTTCACTCTTTCCATTTCAAATCTCAATACTCCAATAACCCTAACAGTGTATGACAAAGACAAGTTCACAGAAGATGATAAAATGGGTGATGCAGAGATTGACATCAAACCCTACATAGAATGTCTTAAAATGGGTTTGAAGAATCTACCAAATGGGTGTGCGGTTAAGAGAATTCAGCCGGACCGCTCGAACTGCCTCTCCGACGAGAGCTCGTGTGTTTGGAACGAAGGAAAAATTGTTCAGGACATGCCTCTCCGGTTGAGGAATGTAGAGTGTGGGGAAGTTATGATTCAGATTGAGTTGATCGTTGGTCCTCAATCTGAACCTTATTTGGCCATTAAAGACTAG 528 42.05 METFQGLLKIRVQRGVNLAVRDVRTRTSDPYVFIEFNHKQLQRLTTRVVKKNCNPVWNEDFTLSISNLNTPITLTVYDKDKFTEDDKMGDAEIDIKPYIECLKMGLKNLPNGCAVKRIQPDRSNCLSDESSCVWNEGKIVQDMPLRLRNVECGEVMIQIELIVGPQSEPYLAIKD 175
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15275567 15276474 - Bpe003288.1 Bpe10g00983 110105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00983 175 Pfam C2 domain 7 97 IPR000008 -
Bpe10g00983 175 ProSiteProfiles C2 domain profile. 1 111 IPR000008 -
Bpe10g00983 175 PRINTS C2 domain signature 24 36 IPR000008 -
Bpe10g00983 175 PRINTS C2 domain signature 51 64 IPR000008 -
Bpe10g00983 175 PRINTS C2 domain signature 72 80 IPR000008 -
Bpe10g00983 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 164 - -
Bpe10g00983 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 96 IPR035892 -
Bpe10g00983 175 Gene3D C2 domain 2 170 IPR035892 -
Bpe10g00983 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Bpe10g00983 175 SMART C2_3c 7 107 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01998 Bpe-Chr2:21710800 Bpe10g00983 Bpe-Chr10:15275567 3.48E-67 dispersed
Bpe10g00983 Bpe-Chr10:15275567 Bpe11g01867 Bpe-Chr11:15041547 5.96E-90 dispersed
Bpe10g00983 Bpe-Chr10:15275567 Bpe15g00515 Bpe-Chr15:16350028 8.78E-63 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00983 - - zju:107429323 239.195