Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00996 ATGGAGTCAAACGGAAGTAACGTTTGCTTGGATATAGCAATGGAGGTTCATCAGGTTTTGGCGCCACCCCATAAAACGGCCATGCAAAAGCTGAAGAGCAGAATGAAAGAGACCTTCTTCTCCGATGACCCTCTCCGTCAGTTTAAAGGGCAGCCTACGAAAAGGAAGTGGATTCTTGCAGCTCAGTATTTCTTCCCTATTCTTCAATGGGGTCCTACTTACACTCTCAAGCTTTTCAAATCCGACATTGTTTCTGGCCTTACAATTGCTAGTTTAGCCATTCCTCAGGGCATCAGTTATGCCAAGCTAGCAAATCTTCCTCCAATCGTGGGTCTCTATTCAAGCTTTGTTCCTCCTCTGGTATATGCTGTTCTTGGTAGCTCGAGGGATCTGGCAGTAGGCCCAGTTTCCATTGCTTCGCTCATACTTGGATCAATGTTGAGGCAAGAAGTTTCTCCAACTAAAGACCCTGTTGTCTTTCTTCAGCTTGCTCTCACTTCCACTCTCTTTGCTGGCCTCTTCCAAGCTTGTTTGGGTTTTTTAAGGCTTGGATTTATAATTGATTTTCTGTCAAAGGCGACACTGATTGGGTTCATGGGAGGAGCCGCCATTATCGTGTCTCTGCAACAGCTTAAAAGCCTGCTGGGGATCCAGCATTTCACAAACCAAATGGGTTTAATTCCTGTCTTGACCTCCGTTTTTCATCATACCAACGAGGCATGTTGTGTTGTGTGCGCGCAGTGGTCATGGCAGACTATAGTGATGGGAGCGTGCTTCTTGTTTTTACTGCTTCTCACCAGACACATTAGCATCAAGAGGCCGAAGCTGTTCTGGGTGTCAGCCGGAGCCCCTCTTGTCTCTGTCATTCTCTCCACCATCCTCGTTTTCGCCTTCAAAGCTAACACCCATGGGATCAGCATTATCGGAAAATTGCAAGAAGGCCTCAATCCTTCCTCGTTGAATATGCTGAACTTTAAAGGCGACTATTTAGGGCTTGTGTTGAAGACTGGCCTCGTCACTGGCATCATTTCTCTCACTGAAGGAATTGCAGTTGGGCGGACTTTTGCTGCTATAAAGGACTATCGAGTTGATGGAAACAAAGAGATGATAGCTATTGGCCTAATGAACGTGGTTGGCTCATTTACTTCCTGTTATGTAACAACAGGTGCCTTTTCAAGGTCGGCTGTGAATCACAACGCTGGAGCCAAAACTGCAGTATCTAACATCGTAATGTCTGTGACGGTTATGGTGACACTTCTCTTCCTAATGCCCCTATTTCAATATACGCCAAATCTTGTATTGGCTGCAATTATTGTTACAGCTGTGGTTGGCCTCATTGATGTACCTGCTGCTTATAGCATTTGGAAGATTGACAAATTCGATTTTGTTGTAATGTTATGTGCATTCTTTGGAGTTCTTTTGATCTCTGTCCAAAATGGCCTGGCTATTGCTGTTGGTTTGTCCATTTTGAAGATCATCCTGCAAGTAACCAGGCCAAAAACAATGATGCTGGGTAACATTCCCGGGACAGATATATATCGTAATATTCACCATTACAAGGAAGCCCTGAGAGTTCCTGGCTTTCTTATTTTATGCATTGAAGCTCCAATCAACTTTGCTAACACCACATATCTCAATGAAAGGATATTGAGATGGATAGAAGAATATGAAGCAGAAGATGATAACATTAAAAAGGGATCAAGCCTTCACTTTCTCATACTAGAAATGTCAGCTGTGAGTGCCATAGACACTAGTGGAGTTACACTTTTCAAAGACTTGAGGAGATCTATGGAAAAGAAGGGTCTTGTATTGGTGAATCCCGTGGGAGAGGTTATGGAGAAGTTAATAAAAGCAGACGATGGCAGAGAATTTATGAGGCCAGATAATCTGTACTTGACAGTTGGAGAGGCAGTAGCTTTTCTCTCAACGACAATCAAAGGACAACCATAA 1950 43.74 MESNGSNVCLDIAMEVHQVLAPPHKTAMQKLKSRMKETFFSDDPLRQFKGQPTKRKWILAAQYFFPILQWGPTYTLKLFKSDIVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQEVSPTKDPVVFLQLALTSTLFAGLFQACLGFLRLGFIIDFLSKATLIGFMGGAAIIVSLQQLKSLLGIQHFTNQMGLIPVLTSVFHHTNEACCVVCAQWSWQTIVMGACFLFLLLLTRHISIKRPKLFWVSAGAPLVSVILSTILVFAFKANTHGISIIGKLQEGLNPSSLNMLNFKGDYLGLVLKTGLVTGIISLTEGIAVGRTFAAIKDYRVDGNKEMIAIGLMNVVGSFTSCYVTTGAFSRSAVNHNAGAKTAVSNIVMSVTVMVTLLFLMPLFQYTPNLVLAAIIVTAVVGLIDVPAAYSIWKIDKFDFVVMLCAFFGVLLISVQNGLAIAVGLSILKIILQVTRPKTMMLGNIPGTDIYRNIHHYKEALRVPGFLILCIEAPINFANTTYLNERILRWIEEYEAEDDNIKKGSSLHFLILEMSAVSAIDTSGVTLFKDLRRSMEKKGLVLVNPVGEVMEKLIKADDGREFMRPDNLYLTVGEAVAFLSTTIKGQP 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15375493 15380068 - Bpe003301.1 Bpe10g00996 110118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00996 649 ProSitePatterns SLC26A transporters signature. 108 129 IPR018045 GO:0008271|GO:0008272
Bpe10g00996 649 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Bpe10g00996 649 PANTHER SULFATE TRANSPORTER 15 647 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe10g00996 649 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Bpe10g00996 649 Pfam STAS domain 519 637 IPR002645 -
Bpe10g00996 649 PANTHER BNAA09G30120D PROTEIN 15 647 IPR030313 -
Bpe10g00996 649 TIGRFAM sulP: sulfate permease 66 615 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe10g00996 649 SUPERFAMILY SpoIIaa-like 523 641 IPR036513 -
Bpe10g00996 649 Pfam Sulfate permease family 79 467 IPR011547 GO:0016021
Bpe10g00996 649 Gene3D STAS domain 498 644 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00633 Bpe-Chr10:13103021 Bpe10g00996 Bpe-Chr10:15375493 0 dispersed
Bpe10g00996 Bpe-Chr10:15375493 Bpe11g00223 Bpe-Chr11:1487296 0 dispersed
Bpe10g00996 Bpe-Chr10:15375493 Bpe06g00723 Bpe-Chr6:17711249 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00996 K17471 - tcc:18609783 1018.45