Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00998 ATGGCCATCAGCTCCGCCATTGCCGCCTTCAAGTCTTCGAAGATCATCTCTTGGAAACCAACAGGTCTGCTTCAGCAAACTCTGTCAGGAGTGATAGAGAGGAGCGGGACTGGTCTGCACTCTGGCAAGGTTTCGACGGTCAAACTGTGGCCAGAGTCTTCCGGAAAAGGCAGATTCTTTTGTTTTAAATTCAATCAGGTCCAGGCAGCCATTGATAATGTTGAAGTATCTCCTCTTTGTACCACGCTTACCAAAAATGGGTTTAGGATTCGAACGGTTGAGCACTTGCTTTCGGCTCTGGAGGCTACCGGTGTTGATAATTGCAGGATCGAGATTATCAACCCCGATGCAAGAGACTGTGATGTTGAGGTCCCTATTTTTGATGGGTCAGCCGGTGAATGGGTGGATGCAATAAATAAAGTTGGTCTTGAAGTGGCTACAGACGTATCAAGCAGCAGCTGTGAAAAAATGGCACCATATGTAAAGGAACCAGTATATGTGTGGAGGAATGATTCTTTTCTGGCTGCTTTCCCTGCTGCAGAGTTACGCATCACATGTGGAATTGACTTCCCACAGGTACCTCAAATAAGTCATCAATGGTTTTCCACGACCAAATTGGATCACTTGTTCTATGCTGAACAGATTGCATCAGCAAGAACATTTTGCATTTATGAGGAGGTTGAGCACATGCGCAATAGGGGACTAATAAGAGGAGGCACACTTGAAAATGCTATAGTTTGTAGTTCCTTTAGAGGTTGGCTAAACCCGCCATTGCGATTCCATGATGAACCATGTCGACACAAGCTCTTAGATCTCATTGGTGATCTTTCCCTTCTTGCTCAGTCAGGTAGTCGAGGTCTTCCAGCAGCACACATTGTAGCTTACAAGGCAAGCATTTGCTCTTTTGTTCTATGTCTTGTTTTTGCAATTAATTGA 936 44.98 MAISSAIAAFKSSKIISWKPTGLLQQTLSGVIERSGTGLHSGKVSTVKLWPESSGKGRFFCFKFNQVQAAIDNVEVSPLCTTLTKNGFRIRTVEHLLSALEATGVDNCRIEIINPDARDCDVEVPIFDGSAGEWVDAINKVGLEVATDVSSSSCEKMAPYVKEPVYVWRNDSFLAAFPAAELRITCGIDFPQVPQISHQWFSTTKLDHLFYAEQIASARTFCIYEEVEHMRNRGLIRGGTLENAIVCSSFRGWLNPPLRFHDEPCRHKLLDLIGDLSLLAQSGSRGLPAAHIVAYKASICSFVLCLVFAIN 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15407620 15410910 + Bpe003304.1 Bpe10g00998 110120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00998 311 Gene3D lpxc deacetylase, domain 1 23 149 IPR015870 GO:0008759|GO:0009245
Bpe10g00998 311 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 25 298 IPR004463 GO:0008759|GO:0009245
Bpe10g00998 311 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 1 299 IPR004463 GO:0008759|GO:0009245
Bpe10g00998 311 TIGRFAM lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 24 298 IPR004463 GO:0008759|GO:0009245
Bpe10g00998 311 Gene3D lpxc deacetylase, domain 2 160 300 IPR011334 GO:0008759|GO:0009245
Bpe10g00998 311 SUPERFAMILY Ribosomal protein S5 domain 2-like 24 144 IPR020568 -
Bpe10g00998 311 SUPERFAMILY Ribosomal protein S5 domain 2-like 163 298 IPR020568 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00998 K02535 - qsu:111989198 427.557