Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe10g00999 ATGGACACCCAAATGGAACCCTCGACCACCTCCACGACGGCGCCGGAACCGCATGCCCCGCTTTTACGCCCTCGCCAGCCCTCCACCTCCGAAGGTACCACCTCCCCTGCCCGACCATCCACTCTCGCTTTTCTACTTGGTCGAGCCACCGGCCATCGCGCTCCCTCCATGTTGGTGCGGGAGACTGCGGCTCGGCAGCTCGAGGAGCGCCGGGCCGACTGGGGCTATTCCAAACCCGTGGTGGTGCTCGATATCATGTGGAACGCGGCTTTTGTTGTTGTCACTGTGGTTATGTTGATTTGCACAACCAACGAGCACGCTGACACGCCGCTTCGGCTTTGGATCTGTGGGTACGCTTTGCAGTGTGTGGTTCACGTTGTTCTGGTGTGGTTAGAGTATAGGAGGAGGAGAGTGAGGCGAGTTAGGGATTTGGAGCGGGAGCAGCAGGGAGGAGATGCTACGAATGAAAGCGAGGATGAGGATTCAGGACAGAGGGGTTTGGCTAGTTTGAACCATGTCAACAAACGATGTGAATCAGTAAACACTATGGCATCATTTCTCTGGTGGATAGTTGGCTTCTATTGGGTTGTCTCCGGTGGTGATGATCTTCTGCGAAAAGCTCCTCATTTGTATTGGTTGGCTGTTGTCTTTCTGGCATTTGATGTGTTTTTTGCCATCTTTTGTGTTGTTTTGGCATGTTTGATTGGGATTGCTCTTTGTTGCTGCTTGCCTTGCATCATTGCTGTTCTCTATGCCGTTGCAGGACAGGAAGGTGCATCGGAAGCAGATCTTAGTATCCTCCCAAAATACAGATTTCAAGCGTTTAATGACGAAGAGAAGGCCAATGTGGGGGTTGGTTTGATGGTTCCTGTAGAAACAAGCAGTGGATACTTGGCGACCGAGAAAACACTTTTATCTGAGGATGCAGAGTGTTGTATATGTTTGAGTTCATATGAGGATGGAGCAGAGCTCAATGCTCTTCCCTGTAGCCACCATTTCCACTCTGCGTGTATCATAAAATGGCTGAAGATGAATGCTACATGTCCTCTTTGCAAATACAACATTCTCAAAGGCTGTGAGCAAGTGTAA 1089 50.51 MDTQMEPSTTSTTAPEPHAPLLRPRQPSTSEGTTSPARPSTLAFLLGRATGHRAPSMLVRETAARQLEERRADWGYSKPVVVLDIMWNAAFVVVTVVMLICTTNEHADTPLRLWICGYALQCVVHVVLVWLEYRRRRVRRVRDLEREQQGGDATNESEDEDSGQRGLASLNHVNKRCESVNTMASFLWWIVGFYWVVSGGDDLLRKAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAVLYAVAGQEGASEADLSILPKYRFQAFNDEEKANVGVGLMVPVETSSGYLATEKTLLSEDAECCICLSSYEDGAELNALPCSHHFHSACIIKWLKMNATCPLCKYNILKGCEQV 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 15412528 15415040 - Bpe003305.1 Bpe10g00999 110121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe10g00999 362 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 358 IPR013083 -
Bpe10g00999 362 ProSiteProfiles Zinc finger RING-type profile. 311 352 IPR001841 -
Bpe10g00999 362 MobiDBLite consensus disorder prediction 1 16 - -
Bpe10g00999 362 PANTHER E3 UBIQUITIN PROTEIN LIGASE RIE1-LIKE 16 359 - -
Bpe10g00999 362 MobiDBLite consensus disorder prediction 1 38 - -
Bpe10g00999 362 Pfam Ring finger domain 310 352 IPR001841 -
Bpe10g00999 362 CDD RING-H2_PA-TM-RING 310 352 - -
Bpe10g00999 362 SUPERFAMILY RING/U-box 299 356 - -
Bpe10g00999 362 PANTHER TARGET OF ERK KINASE MPK-1 16 359 - -
Bpe10g00999 362 SMART ring_2 311 351 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00045 Bpe-Chr3:726536 Bpe10g00999 Bpe-Chr10:15412528 0 dispersed
Bpe05g00632 Bpe-Chr5:20199940 Bpe10g00999 Bpe-Chr10:15412528 5.03E-101 dispersed
Bpe10g00999 Bpe-Chr10:15412528 Bpe14g00565 Bpe-Chr14:4815386 3.17E-38 dispersed
Bpe10g00999 Bpe-Chr10:15412528 Bpe14g01000 Bpe-Chr14:7388684 1.72E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe10g00999 - - tcc:18609876 526.554