Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00010 | ATGGCACTAGTCAAAGAACTACGCATGGGTTTAGCTCAATCTGCCGACCTATCTTCTCAAAGCTCCCATGAAAGTGCAGCAGAAATGGAAAAAAATGGTGGGTTTTCGAAGAATACTGGTTTTTTGTTCCGCAGTTCGATCTACAAACCAGAAATTTCTCGGTCTGTGATAAACTTCAAGGAGCAGGTCGATCGGAATCTAACCCAGTTAAGTATGGAATCATCTTTACTGAGTTTTGGCCAAACCCACCGGTTTGCTCAAGAAGACTATTTCGACTGGCCAGCAGAAGAAGAAAGCTTTAACAATGGCTGTCAATTGAGCCAGATGATCAGCTCTTCTAACCTACGCCTTTTGGACGACTTAAACTGCTTTCAGAAAGCTTCCAGCTTTACTCCCATGACGATTCCTTCAAAAGAAAATCAAAACGGATCAGATGGGTCCAATAATTATTGGCTATATTCTGAAGAATCAGATGTTATTGGTGAAGAGGAGTCAAGAACTGATCTTGAACTAACCCCACAGAAACGACCCCATCTGGGGGAAAGCGAGCAAACTATGAAGAAGCAATGCAATAGTTCAACTAAGAAGACAAAACCAAAGACAAATCCAGCCAAAGATCCGCAAAGTATAGCAGCAAAGAATCGACGAGAGCGGATTAGTGAGAGATTGAAGATTCTGCAAGAACTAGTTCCAAATGGATCCAAGGTTGATTTGGTAACTATGCTGGAGAAAGCAATTAACTACGTCAAATTTCTGCAGCTTCAGGTGAAGATATTGGCGACAGATGAATTCTGGCCAGTTCAAGGAGGGAAAGCTCCTGATATTTCTCAAGTGAGGGACGCCATTGATGCAATTCTTCCTTCACAAAGAGAGAGAAGCTCAAGCTCAAACAGTACAAAGTAA | 903 | 42.08 | MALVKELRMGLAQSADLSSQSSHESAAEMEKNGGFSKNTGFLFRSSIYKPEISRSVINFKEQVDRNLTQLSMESSLLSFGQTHRFAQEDYFDWPAEEESFNNGCQLSQMISSSNLRLLDDLNCFQKASSFTPMTIPSKENQNGSDGSNNYWLYSEESDVIGEEESRTDLELTPQKRPHLGESEQTMKKQCNSSTKKTKPKTNPAKDPQSIAAKNRRERISERLKILQELVPNGSKVDLVTMLEKAINYVKFLQLQVKILATDEFWPVQGGKAPDISQVRDAIDAILPSQRERSSSSNSTK | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 75226 | 76596 | + | Bpe003389.1 | Bpe11g00010 | 110155 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00010 | 300 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 202 | 262 | IPR036638 | GO:0046983 | |
Bpe11g00010 | 300 | MobiDBLite | consensus disorder prediction | 184 | 208 | - | - | |
Bpe11g00010 | 300 | SMART | finulus | 209 | 258 | IPR011598 | GO:0046983 | |
Bpe11g00010 | 300 | MobiDBLite | consensus disorder prediction | 162 | 215 | - | - | |
Bpe11g00010 | 300 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 17 | 293 | - | - | |
Bpe11g00010 | 300 | Pfam | Helix-loop-helix DNA-binding domain | 210 | 253 | IPR011598 | GO:0046983 | |
Bpe11g00010 | 300 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 203 | 252 | IPR011598 | GO:0046983 | |
Bpe11g00010 | 300 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 17 | 293 | - | - | |
Bpe11g00010 | 300 | MobiDBLite | consensus disorder prediction | 164 | 183 | - | - | |
Bpe11g00010 | 300 | CDD | bHLH_AtIND_like | 204 | 266 | - | - | |
Bpe11g00010 | 300 | Gene3D | - | 197 | 260 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00472 | Bpe-Chr5:19025974 | Bpe11g00010 | Bpe-Chr11:75226 | 7.55E-27 | dispersed | |
Bpe11g00010 | Bpe-Chr11:75226 | Bpe11g01227 | Bpe-Chr11:9172418 | 1.19E-157 | dispersed | |
Bpe11g00010 | Bpe-Chr11:75226 | Bpe02g01776 | Bpe-Chr2:20088959 | 1.41E-25 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21998 | PF00010 | HLH | 6.10E-08 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00010 | - | - | tcc:18601899 | 247.284 |