Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00030 ATGGATTTGCTTTCTCCGACATCTTCTCCTTCGAATTCGACCACTTCTTCACCTCCATCTCCGTCAACCACTTCTTCACCTCCATCTCCATCAACTTCTGTTTCACCTCCATCTCCGTCAACCACTTCTTCACCTCCACCTCCACCTCCGTCAACTTCTGCTTCACCTCCATCTCCTTCAACCACTTCTTCACCTCCATCTAATTCTTCAGCTCCACCTCCTCAATCATCTCCGGCTTCTCCTCCTCCATTGTCACCCCCACCATCTTCCCCGTCTCCTTCTCCCCCATCCTCCCCGCCTCCTTCTCCCCTGAAATCTCCGCCACCACCATCTACTCCAACATCTCCACCACCATCACCTACGGCGTCTCCACCACCTTCGCCTCCGGCATTGCCTCCAACGTCAACACCACCACCTCCATCTCCGCCACTTTCACCTCCTCCTCCTCCTCCTCCTGACTTGGCACCACCACCTCCATCCAACAATTCGCCACCTCCTCAATCTGGACCTGATACTCCTCCTCCTCAAAACATCTCACCTCCTCTTCCTCCTCCTCATGCTCCTCCTCCACCAAATGTCATAACGCCCCCTTCCTCAAACCCTCCACCTCCACAATCAGGAAAGTCACCTCCTCCACCCCCAGTACTTCATCTGCCTCCTCCGCCTCACTCCCCATCTGCACCTCCAACTTCCAATTCATCCCCAAGATCTCCATTATCACCTGATTCTCCTCCTCCTCCTCCTCCTCCTTCCATTCCTTCATCATCTCCTACTCCTCCAATTCCTTCACCATCGCCTCCTCCAATGTCGCCTGTTTCCCCAACTAATTCATCCAGCGAAAGTCCTACCTTCTCACCCTTACCTTTTGTTACACCTGAGAAACCAACTGCAAAGGCAGCCACAGGAACCAATGTTACGGTCACTGGTTCATCTGGGAATGGGGGATTAAGTCCCGGATCTTCTGTTGCTATTGCAGTTGTAGTTGGGTTCTTAATACTCAGCCTCGTAGTCATGGCCGTGTGGTTTTTGAAGAGACGGAAGAGAAGAAATGAATTCAAGACTATTCCTTACACCCTCCCTTCTCTTTATACTTCCTCACACAATTCAGATTCGTCATTGCTAAGGTCTCATTCTCCTGTTCCCTTGATGGGAAGTCGGTCAGTGAATGATTTCATGTATTCATCAGCCGAAGCCGGTGGAATGAGCAATTCCAGATGGTTCACTTATGAAGATCTGGTCCAAGCAACAAACTCATTTTCAGCCAAAAATATCTTGGGAGAAGGCGGATTTGGTTGTGTTTTCAAAGGCATTCTTCCAGATGGGAGAGAAATAGCCGTAAAGCAACTAAAAATAGGCGGTGGCCAAGGTGAACGAGAGTTTAGAGCTGAAGTTGATATTATTAGTCGCATTCACCATCGTCATCTGGTTTCTCTAGTTGGCTACTGTATATCGGAATATCAAAGATTGCTCGTCTATGATTATGTTCCGAACAATACTCTGCATTACCATCTCCATGGTAACAGTCCATTGCCTCTGCGGTGGGCAACACGTGCCAGGATTGCGGCCGGTGCTGCTCGGGGGATTGCTTACCTACATGAAGACTGCCATCCCCGCATCATTCACAGGGATATAAAGTCCTCGAACATCCTGCTTGATATCAACTTTGAAGCTCAGGTTGCAGATTTTGGACTCGCAAAATTAACCCTGGATACTCATACACACGTTAGTACTCGTGTCATGGGAACTTTCGGCTACATGGCCCCAGAATATGCAACCAGTGGAAAATTGACTGATAAATCTGATGTTTTCTCATTCGGAGTTGTGCTTTTGGAGCTAATTACTGGTCGGAAACCGGTAGACGACTCTCAGCCATTAGGTGATGAAAGCCTAGTTGAATGGGCTCGTCCACTCCTTGCACAAGCACTTGATAATGAAAATTTCGAAGAACTTGTAGATGCAAGGCTGGAGAAGAACTATGTTCCTAGTGAAATGTTCCGAATGATTGAGGCAGCGGCTGCATGTGTTCGTCACTCTGCCGTTAAAAGGCCACGAATGAGTCAAGTGGTGAGAGCTTTAGACTCATTAGATGAAATGTCAGATCTTGCAAATGGTGTAAAACCTGGGCAAAGTGGGGTGTTTGATTCAGCCCAACATTCTGCTCAAATCAGAATGTTCCAAAGAATGGCATTTGGCAGTCAAGACTTGAGTACCGATTACTTCGATAGAGATCGAAGTCGAAGCCAAAGCAGCTGGAGAAGTAGAGAAGACGACAATCTGAGTTCTTCGACGGCTTTTAATCGATCCAGACAGTTGAATAAT 2319 48.04 MDLLSPTSSPSNSTTSSPPSPSTTSSPPSPSTSVSPPSPSTTSSPPPPPPSTSASPPSPSTTSSPPSNSSAPPPQSSPASPPPLSPPPSSPSPSPPSSPPPSPLKSPPPPSTPTSPPPSPTASPPPSPPALPPTSTPPPPSPPLSPPPPPPPDLAPPPPSNNSPPPQSGPDTPPPQNISPPLPPPHAPPPPNVITPPSSNPPPPQSGKSPPPPPVLHLPPPPHSPSAPPTSNSSPRSPLSPDSPPPPPPPSIPSSSPTPPIPSPSPPPMSPVSPTNSSSESPTFSPLPFVTPEKPTAKAATGTNVTVTGSSGNGGLSPGSSVAIAVVVGFLILSLVVMAVWFLKRRKRRNEFKTIPYTLPSLYTSSHNSDSSLLRSHSPVPLMGSRSVNDFMYSSAEAGGMSNSRWFTYEDLVQATNSFSAKNILGEGGFGCVFKGILPDGREIAVKQLKIGGGQGEREFRAEVDIISRIHHRHLVSLVGYCISEYQRLLVYDYVPNNTLHYHLHGNSPLPLRWATRARIAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDINFEAQVADFGLAKLTLDTHTHVSTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDDSQPLGDESLVEWARPLLAQALDNENFEELVDARLEKNYVPSEMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAQHSAQIRMFQRMAFGSQDLSTDYFDRDRSRSQSSWRSREDDNLSSSTAFNRSRQLNN 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 220895 226070 - Bpe024729 Bpe11g00030 110175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00030 773 ProSiteProfiles Protein kinase domain profile. 419 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00030 773 MobiDBLite consensus disorder prediction 1 20 - -
Bpe11g00030 773 Pfam Protein tyrosine and serine/threonine kinase 421 692 IPR001245 GO:0004672|GO:0006468
Bpe11g00030 773 MobiDBLite consensus disorder prediction 1 316 - -
Bpe11g00030 773 MobiDBLite consensus disorder prediction 21 273 - -
Bpe11g00030 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 539 551 IPR008271 GO:0004672|GO:0006468
Bpe11g00030 773 MobiDBLite consensus disorder prediction 740 773 - -
Bpe11g00030 773 ProSitePatterns Protein kinases ATP-binding region signature. 425 447 IPR017441 GO:0005524
Bpe11g00030 773 Gene3D Transferase(Phosphotransferase) domain 1 495 707 - -
Bpe11g00030 773 SMART serkin_6 419 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00030 773 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 139 746 - -
Bpe11g00030 773 Gene3D Phosphorylase Kinase; domain 1 389 494 - -
Bpe11g00030 773 SUPERFAMILY Protein kinase-like (PK-like) 400 692 IPR011009 -
Bpe11g00030 773 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 139 746 - -
Bpe11g00030 773 MobiDBLite consensus disorder prediction 297 316 - -
Bpe11g00030 773 MobiDBLite consensus disorder prediction 754 773 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00030 Bpe-Chr11:220895 Bpe13g01312 Bpe-Chr13:18259946 3.20E-159 dispersed
Bpe11g01775 Bpe-Chr11:14114177 Bpe11g00030 Bpe-Chr11:220895 3.34E-162 dispersed
Bpe10g00918 Bpe-Chr10:14803184 Bpe11g00030 Bpe-Chr11:220895 0 wgd
Bpe11g00030 Bpe-Chr11:220895 Bpe11g01206 Bpe-Chr11:8979450 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63553 PF07714 PK_Tyr_Ser-Thr 1.70E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00030 - - csv:101211665 686.026