Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00047 ATTGTTTTTTTAGATGAGTTTTCTGGATTTTTTTTTTCTCAACTTCTTCTGTTTTTATTTCTAATTTCAGTGGCTTATGATCCTTTGGATCCCAATGGAAATATAACTATTAAGTGGGATGTAATGTCTTGGACCCCAGATGGCTACGTGGCAGTGGTGACGATGAACAATTTCCAAATGTACCGACACATCATGAGCCCGGGGTGGACACTCGGGTGGACGTGGGCAAAGAAAGAGGTCATATGGTCCGTGGCCGGGGCTCAAACCACCGAGCAAGGTGACTGCTCAAAGTTCAAAGGAAACATCCCCCATTGCTGCAAGAAGAGTCCCACAGTTGTGGACTTGCTGCCTGGAGTCCCTTACAATCAGCAATTCACCAATTGCTGCAAAGGTGGAGTTGTGGCTGCTTGGGGTCAAGATCCTCAGGCTTCGGTCTCGGCCTTCCAGATAAGCGTCGGCCTTTCCGGCTCCTCGAATAAGACTGTCAAGCTCCCGAAGAACTTCACCCTGTTAGGCCCCGGTCCCGGCTACACGTGTGGTCCTGCTAAGATCGTCCCTTCCACAACCTTTCTCACCCCGGATCGTCGGCGGAAAACTCAAGCTTTGATGACATGGAACGTAACTTGCACTTATTCGCAATTTCTCGCCCGGAAAAACCCAAGTTGCTGTGTTTCTTTCTCGTCTTTCTACAACGAAACTATCACCCCTTGTCCATCTTGTGCATGTGGCTGCCCCGACAAAAATAATTGTGTCAAGAGCGATTCCAAGATTCTTACGGTGGTGGGAATAAATACGCCGAAGAAAGACAACTCCCCTCTTCTACAATGCACGCACCATATGTGTCCCGTTCGAGTTCATTGGCACGTCAAGCAAAACTACAAAGACTACTGGCGGGCAAAGATCGCCATCACCAACTTCAACTATAGAAAGAACTACACTCTCTGGTCTCTCGTCGTTCAGCACCCGAATCTCAACAACGTGACCCAAGTTTTCAGCTTTGATTACAAGTCACTCGTTCCCTACGAGTCGATAAATGACACAGGAATGTTTTATGGCATGAAATACTATAACGACCTGTTAATGGAAGCTGGACCATTTGGAAATCTTCAGTCTGAGGTGCTTCTTCAAAAAGACGAGAACACTTTCACCTTCAAGCAGGGATGGGCATTTCCTCGGAAAGTTTACTTCAATGGCGACGAATGTATGCTGCCGCCACCCGATCAATATCCGTTTCTACCTAATTCTGCAGGCCGGAATCCAATCACCTACTTCTTTTCAACCGTTTCCATGCTCTTCTTGTTCATGGCAAACTACTAA 1317 47.0 IVFLDEFSGFFFSQLLLFLFLISVAYDPLDPNGNITIKWDVMSWTPDGYVAVVTMNNFQMYRHIMSPGWTLGWTWAKKEVIWSVAGAQTTEQGDCSKFKGNIPHCCKKSPTVVDLLPGVPYNQQFTNCCKGGVVAAWGQDPQASVSAFQISVGLSGSSNKTVKLPKNFTLLGPGPGYTCGPAKIVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPSCCVSFSSFYNETITPCPSCACGCPDKNNCVKSDSKILTVVGINTPKKDNSPLLQCTHHMCPVRVHWHVKQNYKDYWRAKIAITNFNYRKNYTLWSLVVQHPNLNNVTQVFSFDYKSLVPYESINDTGMFYGMKYYNDLLMEAGPFGNLQSEVLLQKDENTFTFKQGWAFPRKVYFNGDECMLPPPDQYPFLPNSAGRNPITYFFSTVSMLFLFMANY 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 339267 341339 + Bpe003426.2 Bpe11g00047 110192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00047 438 PIRSF COBRA 3 438 IPR006918 GO:0010215|GO:0031225
Bpe11g00047 438 Pfam COBRA-like protein 49 212 IPR006918 GO:0010215|GO:0031225
Bpe11g00047 438 PANTHER PROTEIN COBRA 15 434 IPR006918 GO:0010215|GO:0031225
Bpe11g00047 438 PANTHER COBRA-LIKE PROTEIN 15 434 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00047 Bpe-Chr11:339267 Bpe12g00108 Bpe-Chr12:775393 8.24E-131 dispersed
Bpe11g00047 Bpe-Chr11:339267 Bpe11g00048 Bpe-Chr11:347099 0 tandem
Bpe12g00518 Bpe-Chr12:11027190 Bpe11g00047 Bpe-Chr11:339267 0 transposed
Bpe11g00047 Bpe-Chr11:339267 Bpe11g01181 Bpe-Chr11:8759675 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00047 - - tcc:18601736 811.986