Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00048 ATGAATTTTCTTCCGTTTGGTCTGCTTGCAGAAGCATATGATGCACTTGATCCAACTGGAAACATCACCATAAAATGGGACGTTATTGCTTGGACTGCTGATGGCTACGTGGCTACCGTGACGATATACAACTTTCAGCAATATCGTCATGTTCAAGCGCCGGGATGGTCGCTAGGATGGACGTGGGCGAAGAGGGAGATAATCTGGAGCATGTTGGGAGGTCAAGCCACAGAGCAAGGAGATTGCTCGAGATTTAAAGGGAATATTCCTCACTGCTGCAAAAAGAATCCAACTGTCGTTGATCTTCTGCCCGGAACTCCTTACAACCAACAAGTTGCCAATTGTTGTAGAGGTGGGGTACTTGCCTCGTGGGTTCAAGACCCGACCAACTCGGCTAGCTCGTTTCAGATCAGTGTCGGTTCTTCAGGAACCACCAATAAGACGGTGAGAGTGCCGAAGAACTTCACTTTGCATGCACCGGGGCCTGGATATACTTGTGGACCTGGAAAGATAGTCAAACCGAGTAAATTTATGACCACGGATAAAAGAAGAGTCACACAAGCATTGATGACATGGAACGTTACATGCACATATTCACAATTTCTGGCTGAGAGAACTCCTACTTGTTGCGTCTCACTGTCGTCTTTCTACAATCGCACGATTGTCAAATGCCCGACATGCTCCTGTGGTTGCCAAAGCAATATGAGTCGGTCTGGTGGCTGTATTACGGAAAAATCGTCACATTTGGCATCGGTCGTTTCAAATCCTGGCACAAAAAACGCTCCTATGATTCAATGTACAAGCCATATGTGTCCGATTAGAGTTCATTGGCATGTCAAACTCAACTATAAAGAATATTGGCGGGTGAAGATTACAGTCACTAATTTCAATTATGCAATGAACTATTCCGACTGGAACATAGTACTTCAGCATCCTAATTTCGACAATCTGACAAAGATTTTCAGCTTCAACTACGAGTCTCTAAGTCCTTATACATCGATAAATGATACTGGAATGCTGTGGGGAATTAAGTTTTACAATGATCTTCTCATGGAAGCAGGACCCTTTGGAAATGTACAGTCCGAGCTACTCTTTCGGAAAGAAAAATCGACCTTCACTTTTGAAAAAGGTTGGGCGTTTCCTCGAAGGGTTTACTTTAATGGCGATAGCTGCGTTATGCCACTGCCCGATGCTTATCCGTCGCTGCCGAATGCCAGTTCTGGCATTGATATTTCCTTTTCTGCTCTTCTTTTGGCTTTCGTTTGTGGGTTGATTCACTTGTTCTTCACTGTTTGA 1296 44.44 MNFLPFGLLAEAYDALDPTGNITIKWDVIAWTADGYVATVTIYNFQQYRHVQAPGWSLGWTWAKREIIWSMLGGQATEQGDCSRFKGNIPHCCKKNPTVVDLLPGTPYNQQVANCCRGGVLASWVQDPTNSASSFQISVGSSGTTNKTVRVPKNFTLHAPGPGYTCGPGKIVKPSKFMTTDKRRVTQALMTWNVTCTYSQFLAERTPTCCVSLSSFYNRTIVKCPTCSCGCQSNMSRSGGCITEKSSHLASVVSNPGTKNAPMIQCTSHMCPIRVHWHVKLNYKEYWRVKITVTNFNYAMNYSDWNIVLQHPNFDNLTKIFSFNYESLSPYTSINDTGMLWGIKFYNDLLMEAGPFGNVQSELLFRKEKSTFTFEKGWAFPRRVYFNGDSCVMPLPDAYPSLPNASSGIDISFSALLLAFVCGLIHLFFTV 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 347099 348984 + Bpe003427.1 Bpe11g00048 110193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00048 431 PIRSF COBRA 3 431 IPR006918 GO:0010215|GO:0031225
Bpe11g00048 431 Pfam COBRA-like protein 36 199 IPR006918 GO:0010215|GO:0031225
Bpe11g00048 431 PANTHER COBRA-LIKE PROTEIN 10 428 - -
Bpe11g00048 431 PANTHER PROTEIN COBRA 10 428 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00746 Bpe-Chr5:20891832 Bpe11g00048 Bpe-Chr11:347099 4.96E-162 dispersed
Bpe11g00048 Bpe-Chr11:347099 Bpe11g01181 Bpe-Chr11:8759675 0 dispersed
Bpe11g00047 Bpe-Chr11:339267 Bpe11g00048 Bpe-Chr11:347099 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00048 - - pvy:116109720 737.258