Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00067 | ATGGCGAAGAAGGAAGAATCTGGCCGAGCAGCTCCCCCACCTCGGCCGACTGTTACTTTACCTCCTCGCCCTTCAATGGAGGATTTTTTTACCGGCGGTTCTGGACCTAGTCCTGGTCCTATGACTCTCGTCTCCAGCTTTTTCGCCGACACCCCGAGCGACTCCCCGGAGTTTCGGTCGTTTTCTGAGTTACTCGCCGGAGCTATGGGCTCTCCAATGGCTATGGGTTTCTTTGGATCCAATTCGAGCCAGAATTCTTCTTTCAAGGAGGGAGGTGGTTCGGAGAAGGAGCTGGGGTTTAAGCAAAGTAGGCCGGTGAATTTGGTGGTTGCTCGGTCTCCTATGTTTACAGTTCCACCTGGTTTGAGTCCATCTGGGTTGCTTAATTCGCCAGGATTCTTTTCACCTCAGGTAGTTGTTGACATTTCTTTTGTTTGTTCTCCATTTCAGAGTCCCTTTGGAATGTCCCACCAGCAAGTTCTTGCTCAGGTTACCGCTCAAGCTGCCCTAGCTCAGTCTCACATGCACATGCAAGCGCCAGCAGATTATCCACCATCTTCAGCCCCTCCAATGGATTCATTGGCATTGATACGTCATCCATCATTTAATGTCGACGAAACTTCACAAAAGTCAATATCAGATCCCAAAAGTTCTATGATCGAATCACCAGAGGTCTATCAGTCTGACAAGAAACATGAACCTCCTCCACATGCCGCAGATAAACCAACAGATGATGGATACAACTGGAGAAAGTATGGTCAGAAGCAGGTTAAAGGCAGTGAATTTCCACGAAGCTATTATAAATGCTCACATCAGAATTGCCCCGTCAAAAAGAAGGTTGAGCGCTCTCTTGACGGCCATATTACTGAAATTATCATCAAAGGCAAGCACAGCCATGATCCACCTCAACCCAATAAACGTTCGAAAGATGGTGGTGAAGCAACTGGCCTTTTACGTTCTCTCCCTATGACAGAAGTCAACTCACATATCAGCACCGGAAATTTTAAAAAGTCAGGCGAAGCTGTACAAGCAGGTTCCAGTGACAGCGAAGAATTGCGTGAAATAGAGAGAACAGAAGACAGGGATGTTGATGAGCCAAATCCAAAAAGGCAGAACATAGATGGGGGGACATCTGGGGTTAGTTCAGCTACAAAGACACTTACAGAACCAAAAATCATAGTTCAAACACGAAGTGAGGTTGATCTTTTAGATGATGGCTATAGATGGCGCAAGTACGGCCAAAAGGTGGTCAAAGGAAATCCTTATCCACGGAGCTACTATAGATGCACTCATGTCGGATGCAATGTTCGTAAGCACGTTGAGAGAGCCTCAACAGATCCCAAGGCCGTAATAACGACGTATGAAGGAAAACACAATCACCACCTTCCAGCAGCAAGAAGTAGTAGCCACAACACAGCCAACAACAACTCCCTGGAAATTAAACCACTCAGGGTTGTGGCTCAAAAACACCCATTACTCAAAGACATGGATTTTGGAGCTAATGAACAGAGACCTGCTGTTTTGCAGCTTAAAGAAGAGCAAATTAGAGTATAA | 1554 | 46.27 | MAKKEESGRAAPPPRPTVTLPPRPSMEDFFTGGSGPSPGPMTLVSSFFADTPSDSPEFRSFSELLAGAMGSPMAMGFFGSNSSQNSSFKEGGGSEKELGFKQSRPVNLVVARSPMFTVPPGLSPSGLLNSPGFFSPQVVVDISFVCSPFQSPFGMSHQQVLAQVTAQAALAQSHMHMQAPADYPPSSAPPMDSLALIRHPSFNVDETSQKSISDPKSSMIESPEVYQSDKKHEPPPHAADKPTDDGYNWRKYGQKQVKGSEFPRSYYKCSHQNCPVKKKVERSLDGHITEIIIKGKHSHDPPQPNKRSKDGGEATGLLRSLPMTEVNSHISTGNFKKSGEAVQAGSSDSEELREIERTEDRDVDEPNPKRQNIDGGTSGVSSATKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYRCTHVGCNVRKHVERASTDPKAVITTYEGKHNHHLPAARSSSHNTANNNSLEIKPLRVVAQKHPLLKDMDFGANEQRPAVLQLKEEQIRV | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 458552 | 461552 | + | Bpe003447.1 | Bpe11g00067 | 110212 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00067 | 517 | PANTHER | WRKY PROTEIN | 10 | 516 | - | - | |
Bpe11g00067 | 517 | SUPERFAMILY | WRKY DNA-binding domain | 395 | 463 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 347 | 369 | - | - | |
Bpe11g00067 | 517 | ProSiteProfiles | WRKY domain profile. | 398 | 463 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 10 | 516 | IPR044810 | GO:0003700 | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 204 | 224 | - | - | |
Bpe11g00067 | 517 | ProSiteProfiles | WRKY domain profile. | 238 | 302 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 225 | 248 | - | - | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 292 | 307 | - | - | |
Bpe11g00067 | 517 | SUPERFAMILY | WRKY DNA-binding domain | 241 | 302 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | Pfam | WRKY DNA -binding domain | 404 | 460 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | Pfam | WRKY DNA -binding domain | 244 | 299 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 204 | 250 | - | - | |
Bpe11g00067 | 517 | SMART | WRKY_cls | 403 | 462 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | SMART | WRKY_cls | 243 | 301 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 292 | 384 | - | - | |
Bpe11g00067 | 517 | Gene3D | WRKY domain | 388 | 464 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | Gene3D | WRKY domain | 236 | 303 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe11g00067 | 517 | MobiDBLite | consensus disorder prediction | 321 | 345 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe11g00067 | Bpe11g01442 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g01295 | Bpe-Chr3:31461146 | Bpe11g00067 | Bpe-Chr11:458552 | 1.33E-72 | dispersed | |
Bpe04g01596 | Bpe-Chr4:22188185 | Bpe11g00067 | Bpe-Chr11:458552 | 5.41E-13 | dispersed | |
Bpe09g00135 | Bpe-Chr9:910747 | Bpe11g00067 | Bpe-Chr11:458552 | 2.32E-82 | dispersed | |
Bpe02g01307 | Bpe-Chr2:16567527 | Bpe11g00067 | Bpe-Chr11:458552 | 9.10E-15 | transposed | |
Bpe04g01294 | Bpe-Chr4:19204471 | Bpe11g00067 | Bpe-Chr11:458552 | 3.34E-79 | transposed | |
Bpe10g00889 | Bpe-Chr10:14629200 | Bpe11g00067 | Bpe-Chr11:458552 | 1.58E-115 | wgd | |
Bpe11g00067 | Bpe-Chr11:458552 | Bpe11g01442 | Bpe-Chr11:10705132 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22001 | PF03106 | WRKY | 1.70E-25 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00067 | - | - | csv:101223114 | 655.21 |