Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00067 ATGGCGAAGAAGGAAGAATCTGGCCGAGCAGCTCCCCCACCTCGGCCGACTGTTACTTTACCTCCTCGCCCTTCAATGGAGGATTTTTTTACCGGCGGTTCTGGACCTAGTCCTGGTCCTATGACTCTCGTCTCCAGCTTTTTCGCCGACACCCCGAGCGACTCCCCGGAGTTTCGGTCGTTTTCTGAGTTACTCGCCGGAGCTATGGGCTCTCCAATGGCTATGGGTTTCTTTGGATCCAATTCGAGCCAGAATTCTTCTTTCAAGGAGGGAGGTGGTTCGGAGAAGGAGCTGGGGTTTAAGCAAAGTAGGCCGGTGAATTTGGTGGTTGCTCGGTCTCCTATGTTTACAGTTCCACCTGGTTTGAGTCCATCTGGGTTGCTTAATTCGCCAGGATTCTTTTCACCTCAGGTAGTTGTTGACATTTCTTTTGTTTGTTCTCCATTTCAGAGTCCCTTTGGAATGTCCCACCAGCAAGTTCTTGCTCAGGTTACCGCTCAAGCTGCCCTAGCTCAGTCTCACATGCACATGCAAGCGCCAGCAGATTATCCACCATCTTCAGCCCCTCCAATGGATTCATTGGCATTGATACGTCATCCATCATTTAATGTCGACGAAACTTCACAAAAGTCAATATCAGATCCCAAAAGTTCTATGATCGAATCACCAGAGGTCTATCAGTCTGACAAGAAACATGAACCTCCTCCACATGCCGCAGATAAACCAACAGATGATGGATACAACTGGAGAAAGTATGGTCAGAAGCAGGTTAAAGGCAGTGAATTTCCACGAAGCTATTATAAATGCTCACATCAGAATTGCCCCGTCAAAAAGAAGGTTGAGCGCTCTCTTGACGGCCATATTACTGAAATTATCATCAAAGGCAAGCACAGCCATGATCCACCTCAACCCAATAAACGTTCGAAAGATGGTGGTGAAGCAACTGGCCTTTTACGTTCTCTCCCTATGACAGAAGTCAACTCACATATCAGCACCGGAAATTTTAAAAAGTCAGGCGAAGCTGTACAAGCAGGTTCCAGTGACAGCGAAGAATTGCGTGAAATAGAGAGAACAGAAGACAGGGATGTTGATGAGCCAAATCCAAAAAGGCAGAACATAGATGGGGGGACATCTGGGGTTAGTTCAGCTACAAAGACACTTACAGAACCAAAAATCATAGTTCAAACACGAAGTGAGGTTGATCTTTTAGATGATGGCTATAGATGGCGCAAGTACGGCCAAAAGGTGGTCAAAGGAAATCCTTATCCACGGAGCTACTATAGATGCACTCATGTCGGATGCAATGTTCGTAAGCACGTTGAGAGAGCCTCAACAGATCCCAAGGCCGTAATAACGACGTATGAAGGAAAACACAATCACCACCTTCCAGCAGCAAGAAGTAGTAGCCACAACACAGCCAACAACAACTCCCTGGAAATTAAACCACTCAGGGTTGTGGCTCAAAAACACCCATTACTCAAAGACATGGATTTTGGAGCTAATGAACAGAGACCTGCTGTTTTGCAGCTTAAAGAAGAGCAAATTAGAGTATAA 1554 46.27 MAKKEESGRAAPPPRPTVTLPPRPSMEDFFTGGSGPSPGPMTLVSSFFADTPSDSPEFRSFSELLAGAMGSPMAMGFFGSNSSQNSSFKEGGGSEKELGFKQSRPVNLVVARSPMFTVPPGLSPSGLLNSPGFFSPQVVVDISFVCSPFQSPFGMSHQQVLAQVTAQAALAQSHMHMQAPADYPPSSAPPMDSLALIRHPSFNVDETSQKSISDPKSSMIESPEVYQSDKKHEPPPHAADKPTDDGYNWRKYGQKQVKGSEFPRSYYKCSHQNCPVKKKVERSLDGHITEIIIKGKHSHDPPQPNKRSKDGGEATGLLRSLPMTEVNSHISTGNFKKSGEAVQAGSSDSEELREIERTEDRDVDEPNPKRQNIDGGTSGVSSATKTLTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYRCTHVGCNVRKHVERASTDPKAVITTYEGKHNHHLPAARSSSHNTANNNSLEIKPLRVVAQKHPLLKDMDFGANEQRPAVLQLKEEQIRV 517
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 458552 461552 + Bpe003447.1 Bpe11g00067 110212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00067 517 PANTHER WRKY PROTEIN 10 516 - -
Bpe11g00067 517 SUPERFAMILY WRKY DNA-binding domain 395 463 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 MobiDBLite consensus disorder prediction 347 369 - -
Bpe11g00067 517 ProSiteProfiles WRKY domain profile. 398 463 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 10 516 IPR044810 GO:0003700
Bpe11g00067 517 MobiDBLite consensus disorder prediction 204 224 - -
Bpe11g00067 517 ProSiteProfiles WRKY domain profile. 238 302 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 MobiDBLite consensus disorder prediction 225 248 - -
Bpe11g00067 517 MobiDBLite consensus disorder prediction 1 38 - -
Bpe11g00067 517 MobiDBLite consensus disorder prediction 292 307 - -
Bpe11g00067 517 SUPERFAMILY WRKY DNA-binding domain 241 302 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 Pfam WRKY DNA -binding domain 404 460 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 Pfam WRKY DNA -binding domain 244 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 MobiDBLite consensus disorder prediction 204 250 - -
Bpe11g00067 517 SMART WRKY_cls 403 462 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 SMART WRKY_cls 243 301 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 MobiDBLite consensus disorder prediction 292 384 - -
Bpe11g00067 517 Gene3D WRKY domain 388 464 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 Gene3D WRKY domain 236 303 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe11g00067 517 MobiDBLite consensus disorder prediction 321 345 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe11g00067 Bpe11g01442 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01295 Bpe-Chr3:31461146 Bpe11g00067 Bpe-Chr11:458552 1.33E-72 dispersed
Bpe04g01596 Bpe-Chr4:22188185 Bpe11g00067 Bpe-Chr11:458552 5.41E-13 dispersed
Bpe09g00135 Bpe-Chr9:910747 Bpe11g00067 Bpe-Chr11:458552 2.32E-82 dispersed
Bpe02g01307 Bpe-Chr2:16567527 Bpe11g00067 Bpe-Chr11:458552 9.10E-15 transposed
Bpe04g01294 Bpe-Chr4:19204471 Bpe11g00067 Bpe-Chr11:458552 3.34E-79 transposed
Bpe10g00889 Bpe-Chr10:14629200 Bpe11g00067 Bpe-Chr11:458552 1.58E-115 wgd
Bpe11g00067 Bpe-Chr11:458552 Bpe11g01442 Bpe-Chr11:10705132 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22001 PF03106 WRKY 1.70E-25 CL0274 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00067 - - csv:101223114 655.21