Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00077 ATGGGAAATTTAGAAATCCTTCTACTGGTCTCATTTTCCCTTATAGTTTGTTCTGTTAATGGGTATTATGGGGGTTGGACCAACGCCCATGCCACTTTCTATGGTGGAAGTGATGCATCTGGAACGATGGGTGGAGCTTGCGGATATGGGAACCTTTACAGTCAAGGTTATGGGACGAACACTGCAGCTCTAAGCACTGCTTTGTTTAATAATGGACTGAGTTGTGGAGCTTGTTATGAACTAAGATGTGTAGATGACCCACAATGGTGTCTTCCTGGATCAATTATAGTCACTGCAACTAATTTCTGCCCTCCCGGAGGTTGGTGTGATCCTCCTCGTGAACACTTTGATCTCTCCCAACCGGTATTTCAACACATTGCTCAATACAGAGCTGGAATTGTGCCTGTTGCTTACAGAAGGGTAAGTTGCAGAAGAGGTGGAGGGATCAGATTCACGATCAACGGCCATTCATTCTTCAATCTAGTGTTGGTAACCAACGTCGCTGGAGCTGGAGATGTTCATTCTGTGTCCATCAAAGGGTCTAAAGGTGGGTGGCAACCCATGTCAAGAAATTGGGGCCAGAATTGGCAGAGCAATTCCTACTTAAACGGGCAAAGTCTGTCTTTTGCAGTCACGGTCAGTGACGGTCGGACTGTGGTTTCTTACAACGTCGCTCCTTCAGGTTGGTCCTTCGGACAAACCTACTCTGGGTCACAGTTCTGA 723 46.61 MGNLEILLLVSFSLIVCSVNGYYGGWTNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACYELRCVDDPQWCLPGSIIVTATNFCPPGGWCDPPREHFDLSQPVFQHIAQYRAGIVPVAYRRVSCRRGGGIRFTINGHSFFNLVLVTNVAGAGDVHSVSIKGSKGGWQPMSRNWGQNWQSNSYLNGQSLSFAVTVSDGRTVVSYNVAPSGWSFGQTYSGSQF 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 531013 532011 + Bpe003456.1 Bpe11g00077 110222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00077 240 SMART dpbb_1 61 138 IPR007112 -
Bpe11g00077 240 PRINTS Expansin signature 123 136 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 83 94 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 106 123 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 147 159 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 95 105 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 159 180 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 223 239 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 56 70 IPR002963 GO:0009664
Bpe11g00077 240 PRINTS Expansin signature 194 215 IPR002963 GO:0009664
Bpe11g00077 240 Pfam Lytic transglycolase 61 138 IPR009009 -
Bpe11g00077 240 Gene3D - 15 144 IPR036908 -
Bpe11g00077 240 Pfam Expansin C-terminal domain 149 226 IPR007117 -
Bpe11g00077 240 SUPERFAMILY PHL pollen allergen 146 236 IPR036749 -
Bpe11g00077 240 PRINTS Expansin/Lol pI family signature 223 237 IPR007118 GO:0005576
Bpe11g00077 240 PRINTS Expansin/Lol pI family signature 43 61 IPR007118 GO:0005576
Bpe11g00077 240 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Bpe11g00077 240 PRINTS Expansin/Lol pI family signature 25 40 IPR007118 GO:0005576
Bpe11g00077 240 PRINTS Expansin/Lol pI family signature 65 83 IPR007118 GO:0005576
Bpe11g00077 240 PRINTS Expansin/Lol pI family signature 131 147 IPR007118 GO:0005576
Bpe11g00077 240 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 158 237 IPR007117 -
Bpe11g00077 240 SUPERFAMILY Barwin-like endoglucanases 10 166 IPR036908 -
Bpe11g00077 240 Gene3D - 146 240 IPR036749 -
Bpe11g00077 240 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 44 148 IPR007112 -
Bpe11g00077 240 PANTHER EXPANSIN-A15 9 240 IPR002963 GO:0009664
Bpe11g00077 240 PANTHER EXPANSIN-A5 9 240 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe11g01647 Bpe11g00077 ECH
Bpe11g00077 Bpe11g01647 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00077 Bpe-Chr11:531013 Bpe13g01406 Bpe-Chr13:19294928 2.43E-143 dispersed
Bpe10g00880 Bpe-Chr10:14579466 Bpe11g00077 Bpe-Chr11:531013 4.39E-140 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00077 - K20628 vvi:100244103 447.973