Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00081 ATGGAAATAGCTACAATGGAGAGTACTACGAAGTCGATGGAGGGTGGGGAAGATCGGACGGCGACCGGAGTTCTACCGATCAAGCCTTTACCCTTCAGCAACGGTCTTTCAAAGAGGCATAATCGTCTTAATCATGATAATAATCAGGACAAGCTCAACTCCGCCGCTAACTCCGCCGTTTCCTACAAAGAATGCCTGAAAAACCATGCGGCTAGCATAGGAGCTCACGCTTTAGATGGGTGTGGAGAATTCATTCCTTCTCCTTCTGCAACTTCTTCCGATCCCACCTCTTTAAAATGCGCCGCTTGCGGATGTCACCGGAACTTCCACCGCCGCGAGCCTGACGAGCCGATTTTTCCGGCCCCAACAACACAAGTAATCGAGTACCAGCCTCACCACCGCCACCACCCGCCTCCACCCCCTCAGCCAATCAGCCGGAGTCTGAACTCGGCGTCGCCTCCGCCGATCTCGTCTTCCTACTACCCCTCAGCTCCCCACATGCTTCTGGCTCTATCATCAGGGCTATCGGCCCCTCCGGATCCGACTAATCAGTTCTCGAATGGTCGGAAACGATTCAGAACCAGATTCAGCCTGGATCAGAAAGAGAAAATGCACCAGTTTGCCGAGAGAGTTGGGTGGAGGATGCATAAGAGAGACGAAGAACTGGTTCAAGGATTCTGCAATGAAATTGGCGTAGAAAAAGGGGTTTTTAAAGTATGGATGCACAATAACAAAAACTCATCTAGCAAGAAGGACGTTAATGGCGGAACGAATACTCTAGAACTCGCTGAAAACGACAACAACTTCGTCGGAAATCTCAATCGCTACGACGACGATGAAAGGGTACATCCCGCCATTAATGGGTCTTCTTCTTCTTCCTGA 882 50.45 MEIATMESTTKSMEGGEDRTATGVLPIKPLPFSNGLSKRHNRLNHDNNQDKLNSAANSAVSYKECLKNHAASIGAHALDGCGEFIPSPSATSSDPTSLKCAACGCHRNFHRREPDEPIFPAPTTQVIEYQPHHRHHPPPPPQPISRSLNSASPPPISSSYYPSAPHMLLALSSGLSAPPDPTNQFSNGRKRFRTRFSLDQKEKMHQFAERVGWRMHKRDEELVQGFCNEIGVEKGVFKVWMHNNKNSSSKKDVNGGTNTLELAENDNNFVGNLNRYDDDERVHPAINGSSSSS 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 544671 545552 + Bpe003460.1 Bpe11g00081 110226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00081 293 MobiDBLite consensus disorder prediction 274 293 - -
Bpe11g00081 293 PANTHER HOMEOBOX DOMAIN, ZF-HD CLASS PROTEIN 27 271 - -
Bpe11g00081 293 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 27 271 - -
Bpe11g00081 293 Gene3D - 180 251 - -
Bpe11g00081 293 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 62 113 IPR006456 -
Bpe11g00081 293 MobiDBLite consensus disorder prediction 1 48 - -
Bpe11g00081 293 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 62 113 IPR006456 -
Bpe11g00081 293 SUPERFAMILY Homeodomain-like 179 248 IPR009057 -
Bpe11g00081 293 Pfam ZF-HD protein dimerisation region 60 114 IPR006456 -
Bpe11g00081 293 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 189 246 IPR006455 -
Bpe11g00081 293 MobiDBLite consensus disorder prediction 130 159 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe11g00081 Bpe11g01458 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00081 Bpe-Chr11:544671 Bpe14g00177 Bpe-Chr14:2140419 1.67E-89 dispersed
Bpe11g00081 Bpe-Chr11:544671 Bpe11g01458 Bpe-Chr11:10824731 1.90E-122 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22004 PF04770 ZF-HD_dimer 1.10E-28 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00081 - - qsu:112022185 324.709