Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00121 | ATGAGTTCCGTAGAATTAAGAGCCCTTGGGAAGAGGAATTTAGAATGGGATTTGAATGACTGGAAGTGGGATGGGGATCTTTTCATTGCTAGCTCATTGAATTCAGTGCCATCTGATACCCTGAGGCGGCAAATATTTCCAATTGGAACAATTCCAGAGACTGGAGGCTCATCAAACAGCTCCTCATCATGCTCGGACGATGCTAATATGAGAATCGAGAAAGGGAAGAAAGAAATCGAGAAAAGGAGGAGGATTACTGGGTTGGAAGATAGAGCCTTGCATGACGAAACTGGTGGACTTATTTTAAAGCTCGGTTCTCATGGGTATCCGCTTCCTGAGAGGGAATTAGGGAGTTGGGAGGGATGTAATGGAAAGAAGACGAAATTGGTAGGAGGAAGTTCAAATCGTGCAATTTGCCAGGTGGAGGACTGTGGAGCTGATCTGAGCAAGGCCAAAGATTATCATAGACGACATAAAGTCTGTGAGATGCATTCTAAAGCCAGTAGGGCGCTGGTGGGGAACCTCATGCAGCGTTTCTGTCAACAATGTAGCAGGTTTCATGTTCTTCAAGAGTTTGACGAAGGAAAAAGAAGTTGTCGCAGGCGTTTGGCAGGTCATAACAAGCGAAGAAGAAAAACAAATCCCGAGCCAGCTGCTAATGGAAGCTCCTCAAATGAAGATCAAACCAGTGGCTATCTACTCATTAGCCTGTTGAGAATACTTTCCAACATGCATTCGAATCAATCAGACCAAACCACCGATCAGGATCTGATATCACATCTTTTGAGGAGCATTGCCAGTCAAAGTACTGAGCACAAGGAGAAAGACATATCCGTACATTTGCAGAATCTGCAAAATGGGATATCAGTTTGTAATTCAGAACTAGCCTCTACTTTTCTTTCAAATGGCGCTCAGGATCCTTCAATGCCATCAAAACAGCATGCGACTTTGCCATCGTCTGAGATTCCATCACAAGGGAAAAGCAAGACGAATGACTTTGATTTGAACGACATATACGTTGACTCTGATGATGGAACTGAAGATGTAGAGAGATCTGTACTCCCTGTCCATTTAGGGGCCAGTTCCCTAGAGTCCCCTTGGGCGCAACAAGACTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCAGCATCTGCTCAGTCACCTTCTAGCTCTAGTGGAGAAGCTCAGAGCCGGACAGATCGTATTGTTATTAAACTATTTGGAAAAGAGCCCGGTGATTTTCCTCACAATCTACGGGCACAGGTTCTTGATTGGTTGCAACATAGTCCGACTGACATGGAGAGCTACATTAGACCTGGTTGCGTTGTTCTGACAATTTACCTACGTCAGACAGAAGATGCATGGAATGAACTTTGCTATGACCTAAGTTGTGGCTTGAGTAGGCTTCTACAAGGCTCAGATGATGCTTTCTGGAGCACAGGATGGGTTTATGTTAGAATTCAGCATCAATTAGCATTTGTTTTACATGGTCAAGTTGTGGTAGATACGTCCTTAGCCCTTCGAAATAACAATTATTGTAACATTGTCTGCGTAAAACCTATTGCCGTATCTGCATCAGAGAGGGTTCAGTTCTTAGTTAGAGGCTCGAATTTGAAGAGGCCTGGAACGAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGACCGAGAAGGTTGCTCAAGAATCAACTGATTCTGTTGATGCATTAATGGAGCATAATGAGATCCAATGCATTAGCTTTTCTTGCTCTATTCCTATAGTGAATGGAAGGGGCTTCATTGAGGTTGAAGATCATGGATTCAGCAGCAGCTTTTTTCCATTTATAGTCACAGAGGATGATGTATGTTCAGAAATTCGTGTTCTTGAGTCTGAACTGGAGTCGTCGGGAGCTGTAGTAATGGAAACAAGGGTTCAAGCGATGGATTTTATTCATGAAATGGGATGGCTTCTTCATAGAGAACAACTGAAGTCTAAATTGAGCAATTTGAATCCAAATCCAGATCTTTACCCTTTGAATAGGTTTAAGTGGCTCATGGATTTCTCGATAGACCACGATTGGTGTGCTGTTGTGAGGAAATTATTAAACATTCTTCTTGATGGAAATGTGAATGTTGGAGATCACCCATCGGCGAACGCTGCCTTATCTGAGATGGGTATTCTTCACCAGGCTGTAAGGAGAAACAGCAAGTCGCTTGTCGAGCTCCTTTTGAGATATAACCCCAAAAAAGCGAGATGTGAAGAAAATTCAGTGGTTGATGGAGGGGTTGAAGGGTTTTTGTTTAGGCCTGATGTTACTGGACCTGGAGGCTTGACTCCACTTCACATTGCAGCCGGCAAAGACGGGTCTGAGGATGTCCTGGATGCATTAACTGACGATCCCGACATGGTCGGAATGGAAGCGTGGAAGATCATTCGAGACAGTACGGGGTCCACACCTGAAGATTATGCGCGCTTACGTGGCCATTTCTCGTACATCCATCTTGTCCAGAAGAAAATCAATAAGAGGCTTACGCCTGGCCATGTAGTTCTCGACATTCCTACAGGTCTCTCAGAATCTGTGACAAATGTTAAGCAATCGGACAATTTGGGCACTTTCTTTGAGATTGGAACGGCCCAGCCAAGAACCGGTCTTAGGAACTGTAGGTACTGTGATAAGAAACTCACTTGTGGAAAATTGAGCAGGTCTCTGGTTTACAGGCCGGCAATGTTGTCGATGGTGGCCATTGCCGCCGTTTGTGTGTGTGTGGCACTTCTGTTCAAGAGCTCGCCGGAAGTTCTTTATTGTTTCCAGCCGTTCAGATGGGAATTGTTAGATTACGGAACAAGCTGA | 2841 | 44.39 | MSSVELRALGKRNLEWDLNDWKWDGDLFIASSLNSVPSDTLRRQIFPIGTIPETGGSSNSSSSCSDDANMRIEKGKKEIEKRRRITGLEDRALHDETGGLILKLGSHGYPLPERELGSWEGCNGKKTKLVGGSSNRAICQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGNLMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPEPAANGSSSNEDQTSGYLLISLLRILSNMHSNQSDQTTDQDLISHLLRSIASQSTEHKEKDISVHLQNLQNGISVCNSELASTFLSNGAQDPSMPSKQHATLPSSEIPSQGKSKTNDFDLNDIYVDSDDGTEDVERSVLPVHLGASSLESPWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVIKLFGKEPGDFPHNLRAQVLDWLQHSPTDMESYIRPGCVVLTIYLRQTEDAWNELCYDLSCGLSRLLQGSDDAFWSTGWVYVRIQHQLAFVLHGQVVVDTSLALRNNNYCNIVCVKPIAVSASERVQFLVRGSNLKRPGTRLLCALEGKYLTEKVAQESTDSVDALMEHNEIQCISFSCSIPIVNGRGFIEVEDHGFSSSFFPFIVTEDDVCSEIRVLESELESSGAVVMETRVQAMDFIHEMGWLLHREQLKSKLSNLNPNPDLYPLNRFKWLMDFSIDHDWCAVVRKLLNILLDGNVNVGDHPSANAALSEMGILHQAVRRNSKSLVELLLRYNPKKARCEENSVVDGGVEGFLFRPDVTGPGGLTPLHIAAGKDGSEDVLDALTDDPDMVGMEAWKIIRDSTGSTPEDYARLRGHFSYIHLVQKKINKRLTPGHVVLDIPTGLSESVTNVKQSDNLGTFFEIGTAQPRTGLRNCRYCDKKLTCGKLSRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYCFQPFRWELLDYGTS | 946 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 867113 | 872374 | + | Bpe003498.1 | Bpe11g00121 | 110266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00121 | 946 | SUPERFAMILY | Ankyrin repeat | 685 | 831 | IPR036770 | - | |
Bpe11g00121 | 946 | Pfam | SBP domain | 139 | 212 | IPR004333 | GO:0003677 | |
Bpe11g00121 | 946 | MobiDBLite | consensus disorder prediction | 301 | 332 | - | - | |
Bpe11g00121 | 946 | Gene3D | - | 130 | 200 | IPR036893 | GO:0003677|GO:0005634 | |
Bpe11g00121 | 946 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | 318 | 945 | - | - | |
Bpe11g00121 | 946 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 318 | 945 | IPR044817 | GO:0003677 | |
Bpe11g00121 | 946 | Gene3D | - | 675 | 838 | IPR036770 | - | |
Bpe11g00121 | 946 | MobiDBLite | consensus disorder prediction | 203 | 227 | - | - | |
Bpe11g00121 | 946 | ProSiteProfiles | Zinc finger SBP-type profile. | 136 | 213 | IPR004333 | GO:0003677 | |
Bpe11g00121 | 946 | SUPERFAMILY | SBT domain | 137 | 217 | IPR036893 | GO:0003677|GO:0005634 | |
Bpe11g00121 | 946 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 7 | 306 | IPR044817 | GO:0003677 | |
Bpe11g00121 | 946 | MobiDBLite | consensus disorder prediction | 363 | 401 | - | - | |
Bpe11g00121 | 946 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED | 7 | 306 | - | - | |
Bpe11g00121 | 946 | MobiDBLite | consensus disorder prediction | 301 | 347 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00509 | Bpe11g00121 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g00382 | Bpe-Chr8:2336797 | Bpe11g00121 | Bpe-Chr11:867113 | 2.20E-32 | dispersed | |
Bpe08g01006 | Bpe-Chr8:12391279 | Bpe11g00121 | Bpe-Chr11:867113 | 3.52E-33 | dispersed | |
Bpe11g00121 | Bpe-Chr11:867113 | Bpe13g00713 | Bpe-Chr13:13682608 | 0 | dispersed | |
Bpe14g00644 | Bpe-Chr14:5247438 | Bpe11g00121 | Bpe-Chr11:867113 | 5.86E-30 | dispersed | |
Bpe11g00121 | Bpe-Chr11:867113 | Bpe03g00509 | Bpe-Chr3:24977584 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22008 | PF03110 | SBP | 2.60E-29 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00121 | - | - | pvy:116138190 | 1275.77 |