Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00121 ATGAGTTCCGTAGAATTAAGAGCCCTTGGGAAGAGGAATTTAGAATGGGATTTGAATGACTGGAAGTGGGATGGGGATCTTTTCATTGCTAGCTCATTGAATTCAGTGCCATCTGATACCCTGAGGCGGCAAATATTTCCAATTGGAACAATTCCAGAGACTGGAGGCTCATCAAACAGCTCCTCATCATGCTCGGACGATGCTAATATGAGAATCGAGAAAGGGAAGAAAGAAATCGAGAAAAGGAGGAGGATTACTGGGTTGGAAGATAGAGCCTTGCATGACGAAACTGGTGGACTTATTTTAAAGCTCGGTTCTCATGGGTATCCGCTTCCTGAGAGGGAATTAGGGAGTTGGGAGGGATGTAATGGAAAGAAGACGAAATTGGTAGGAGGAAGTTCAAATCGTGCAATTTGCCAGGTGGAGGACTGTGGAGCTGATCTGAGCAAGGCCAAAGATTATCATAGACGACATAAAGTCTGTGAGATGCATTCTAAAGCCAGTAGGGCGCTGGTGGGGAACCTCATGCAGCGTTTCTGTCAACAATGTAGCAGGTTTCATGTTCTTCAAGAGTTTGACGAAGGAAAAAGAAGTTGTCGCAGGCGTTTGGCAGGTCATAACAAGCGAAGAAGAAAAACAAATCCCGAGCCAGCTGCTAATGGAAGCTCCTCAAATGAAGATCAAACCAGTGGCTATCTACTCATTAGCCTGTTGAGAATACTTTCCAACATGCATTCGAATCAATCAGACCAAACCACCGATCAGGATCTGATATCACATCTTTTGAGGAGCATTGCCAGTCAAAGTACTGAGCACAAGGAGAAAGACATATCCGTACATTTGCAGAATCTGCAAAATGGGATATCAGTTTGTAATTCAGAACTAGCCTCTACTTTTCTTTCAAATGGCGCTCAGGATCCTTCAATGCCATCAAAACAGCATGCGACTTTGCCATCGTCTGAGATTCCATCACAAGGGAAAAGCAAGACGAATGACTTTGATTTGAACGACATATACGTTGACTCTGATGATGGAACTGAAGATGTAGAGAGATCTGTACTCCCTGTCCATTTAGGGGCCAGTTCCCTAGAGTCCCCTTGGGCGCAACAAGACTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCAGATTCAGCATCTGCTCAGTCACCTTCTAGCTCTAGTGGAGAAGCTCAGAGCCGGACAGATCGTATTGTTATTAAACTATTTGGAAAAGAGCCCGGTGATTTTCCTCACAATCTACGGGCACAGGTTCTTGATTGGTTGCAACATAGTCCGACTGACATGGAGAGCTACATTAGACCTGGTTGCGTTGTTCTGACAATTTACCTACGTCAGACAGAAGATGCATGGAATGAACTTTGCTATGACCTAAGTTGTGGCTTGAGTAGGCTTCTACAAGGCTCAGATGATGCTTTCTGGAGCACAGGATGGGTTTATGTTAGAATTCAGCATCAATTAGCATTTGTTTTACATGGTCAAGTTGTGGTAGATACGTCCTTAGCCCTTCGAAATAACAATTATTGTAACATTGTCTGCGTAAAACCTATTGCCGTATCTGCATCAGAGAGGGTTCAGTTCTTAGTTAGAGGCTCGAATTTGAAGAGGCCTGGAACGAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGACCGAGAAGGTTGCTCAAGAATCAACTGATTCTGTTGATGCATTAATGGAGCATAATGAGATCCAATGCATTAGCTTTTCTTGCTCTATTCCTATAGTGAATGGAAGGGGCTTCATTGAGGTTGAAGATCATGGATTCAGCAGCAGCTTTTTTCCATTTATAGTCACAGAGGATGATGTATGTTCAGAAATTCGTGTTCTTGAGTCTGAACTGGAGTCGTCGGGAGCTGTAGTAATGGAAACAAGGGTTCAAGCGATGGATTTTATTCATGAAATGGGATGGCTTCTTCATAGAGAACAACTGAAGTCTAAATTGAGCAATTTGAATCCAAATCCAGATCTTTACCCTTTGAATAGGTTTAAGTGGCTCATGGATTTCTCGATAGACCACGATTGGTGTGCTGTTGTGAGGAAATTATTAAACATTCTTCTTGATGGAAATGTGAATGTTGGAGATCACCCATCGGCGAACGCTGCCTTATCTGAGATGGGTATTCTTCACCAGGCTGTAAGGAGAAACAGCAAGTCGCTTGTCGAGCTCCTTTTGAGATATAACCCCAAAAAAGCGAGATGTGAAGAAAATTCAGTGGTTGATGGAGGGGTTGAAGGGTTTTTGTTTAGGCCTGATGTTACTGGACCTGGAGGCTTGACTCCACTTCACATTGCAGCCGGCAAAGACGGGTCTGAGGATGTCCTGGATGCATTAACTGACGATCCCGACATGGTCGGAATGGAAGCGTGGAAGATCATTCGAGACAGTACGGGGTCCACACCTGAAGATTATGCGCGCTTACGTGGCCATTTCTCGTACATCCATCTTGTCCAGAAGAAAATCAATAAGAGGCTTACGCCTGGCCATGTAGTTCTCGACATTCCTACAGGTCTCTCAGAATCTGTGACAAATGTTAAGCAATCGGACAATTTGGGCACTTTCTTTGAGATTGGAACGGCCCAGCCAAGAACCGGTCTTAGGAACTGTAGGTACTGTGATAAGAAACTCACTTGTGGAAAATTGAGCAGGTCTCTGGTTTACAGGCCGGCAATGTTGTCGATGGTGGCCATTGCCGCCGTTTGTGTGTGTGTGGCACTTCTGTTCAAGAGCTCGCCGGAAGTTCTTTATTGTTTCCAGCCGTTCAGATGGGAATTGTTAGATTACGGAACAAGCTGA 2841 44.39 MSSVELRALGKRNLEWDLNDWKWDGDLFIASSLNSVPSDTLRRQIFPIGTIPETGGSSNSSSSCSDDANMRIEKGKKEIEKRRRITGLEDRALHDETGGLILKLGSHGYPLPERELGSWEGCNGKKTKLVGGSSNRAICQVEDCGADLSKAKDYHRRHKVCEMHSKASRALVGNLMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTNPEPAANGSSSNEDQTSGYLLISLLRILSNMHSNQSDQTTDQDLISHLLRSIASQSTEHKEKDISVHLQNLQNGISVCNSELASTFLSNGAQDPSMPSKQHATLPSSEIPSQGKSKTNDFDLNDIYVDSDDGTEDVERSVLPVHLGASSLESPWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVIKLFGKEPGDFPHNLRAQVLDWLQHSPTDMESYIRPGCVVLTIYLRQTEDAWNELCYDLSCGLSRLLQGSDDAFWSTGWVYVRIQHQLAFVLHGQVVVDTSLALRNNNYCNIVCVKPIAVSASERVQFLVRGSNLKRPGTRLLCALEGKYLTEKVAQESTDSVDALMEHNEIQCISFSCSIPIVNGRGFIEVEDHGFSSSFFPFIVTEDDVCSEIRVLESELESSGAVVMETRVQAMDFIHEMGWLLHREQLKSKLSNLNPNPDLYPLNRFKWLMDFSIDHDWCAVVRKLLNILLDGNVNVGDHPSANAALSEMGILHQAVRRNSKSLVELLLRYNPKKARCEENSVVDGGVEGFLFRPDVTGPGGLTPLHIAAGKDGSEDVLDALTDDPDMVGMEAWKIIRDSTGSTPEDYARLRGHFSYIHLVQKKINKRLTPGHVVLDIPTGLSESVTNVKQSDNLGTFFEIGTAQPRTGLRNCRYCDKKLTCGKLSRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVLYCFQPFRWELLDYGTS 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 867113 872374 + Bpe003498.1 Bpe11g00121 110266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00121 946 SUPERFAMILY Ankyrin repeat 685 831 IPR036770 -
Bpe11g00121 946 Pfam SBP domain 139 212 IPR004333 GO:0003677
Bpe11g00121 946 MobiDBLite consensus disorder prediction 301 332 - -
Bpe11g00121 946 Gene3D - 130 200 IPR036893 GO:0003677|GO:0005634
Bpe11g00121 946 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 318 945 - -
Bpe11g00121 946 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 318 945 IPR044817 GO:0003677
Bpe11g00121 946 Gene3D - 675 838 IPR036770 -
Bpe11g00121 946 MobiDBLite consensus disorder prediction 203 227 - -
Bpe11g00121 946 ProSiteProfiles Zinc finger SBP-type profile. 136 213 IPR004333 GO:0003677
Bpe11g00121 946 SUPERFAMILY SBT domain 137 217 IPR036893 GO:0003677|GO:0005634
Bpe11g00121 946 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 7 306 IPR044817 GO:0003677
Bpe11g00121 946 MobiDBLite consensus disorder prediction 363 401 - -
Bpe11g00121 946 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 1-RELATED 7 306 - -
Bpe11g00121 946 MobiDBLite consensus disorder prediction 301 347 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00509 Bpe11g00121 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00382 Bpe-Chr8:2336797 Bpe11g00121 Bpe-Chr11:867113 2.20E-32 dispersed
Bpe08g01006 Bpe-Chr8:12391279 Bpe11g00121 Bpe-Chr11:867113 3.52E-33 dispersed
Bpe11g00121 Bpe-Chr11:867113 Bpe13g00713 Bpe-Chr13:13682608 0 dispersed
Bpe14g00644 Bpe-Chr14:5247438 Bpe11g00121 Bpe-Chr11:867113 5.86E-30 dispersed
Bpe11g00121 Bpe-Chr11:867113 Bpe03g00509 Bpe-Chr3:24977584 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22008 PF03110 SBP 2.60E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00121 - - pvy:116138190 1275.77