Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00186 | ATGTCTTCTGTCTTGGTGTTGAATGTAGAATCTATGTGGCATTTGGGGCTGACAAGTAGAGAATCGTATCCTGAGCGTCCTGGTGTGCCTAACTGTGTGTATTATATGCGATCTGGATTCTGTGGATATGGAAGCAGATGCCGTTTCAATCATCATCCTGACCGTGCAGCGGTTGCAGCAGCTGTAAGTGCTTCTGGGGATTACCCAGAACGAATAGGGGAACCTGTATGCCAGTATTACTTAAAAACTGGGACATGTAAATTTGGGGCATCCCGTAAGTCTCACTATCCAAAACATGGTGGTGGATCCCTTAGCCAGGCTCCTCTTAATATCCATGGATACCCGCTTCGACCGAGCGAAAGAGAATGCTCCTACTATTTGAAAACGGGGCAATGCAAATTCGGTCTAACTTGTAAATTCCACCATCCTCAACCAGCTGGCTCATCCACACCAGCTGCTGCACCTCAGTTTTATCCACCAGTGCAGTCTCCTTCAGTCCCTATGCCCGACCAATATGGAGTGGTATCCACTGGCTTGAGAGTAGCCAGACCACCTCTTTTACCTGGTTCTTATGTGCAAGGGACCTATGGTCCTGTTTTGCTTCCCCCAGGAGTCGTTTCAATTCAAGGATGGAGTCCTTATTCGGCACCTGTAAGCCCTGCATTATCTCCTGGAGCTCAACCCACAGTTGGAGCATCTTCTGTTTATGGCGTAGCCCAGCTGTCTCCTACAACACCATCTCTTCCAAGACCATATCCTTCTTTACCTTTGTCGCTTGGTCCTTCCAGCGGTAATCAAAGGGAACAGTTGTTTCCGGAGAGACCTGGTGAACCAGAATGCCAGTATTACATAAGAACTGGTGATTGCAAGTTTGGGGCAGGTTGCCGATATCATCATCCTCACAATCGAATTGTACCAAGGACAAATTGTGTTCTTAGCCCACTTGGCCTTCCCTTGCGACCGCGACAGTTTCTTATTCTTATTTGTAATGCGCAGGGGGTGCAAGCTTGTACATTTTACTTGCAAAATGGGCACTGCAAATTTGGATCAACCTGTAAATTTGATCATCCGATGGGGACAATGAGATACAGTCCGTCAGCCTCGTCTCTCATTGACATGCCTGTTGCTCCTTATCCTGTTGGGTCTCTGCTGGCCACTTTGGCTCCTCCATCCTCTTCTTCAGAGCTTAATCCAGAGCTGATGTCAGGGTCGAGGAAAGAATCATATTCAGCTAGATTGCCTTCTTCTGACAGTACCTCTAGTAGTACAGTTGGTTTAATTTACTCTCAGACTGGACCTGATGTTCAACTTTCTAGCCAAAGTTCTGCTCCTTTGAACAACAGCAGGAATTCTAGGCAAGGTGGGGAGCCGCGACATTCTAGTTAG | 1386 | 47.33 | MSSVLVLNVESMWHLGLTSRESYPERPGVPNCVYYMRSGFCGYGSRCRFNHHPDRAAVAAAVSASGDYPERIGEPVCQYYLKTGTCKFGASRKSHYPKHGGGSLSQAPLNIHGYPLRPSERECSYYLKTGQCKFGLTCKFHHPQPAGSSTPAAAPQFYPPVQSPSVPMPDQYGVVSTGLRVARPPLLPGSYVQGTYGPVLLPPGVVSIQGWSPYSAPVSPALSPGAQPTVGASSVYGVAQLSPTTPSLPRPYPSLPLSLGPSSGNQREQLFPERPGEPECQYYIRTGDCKFGAGCRYHHPHNRIVPRTNCVLSPLGLPLRPRQFLILICNAQGVQACTFYLQNGHCKFGSTCKFDHPMGTMRYSPSASSLIDMPVAPYPVGSLLATLAPPSSSSELNPELMSGSRKESYSARLPSSDSTSSSTVGLIYSQTGPDVQLSSQSSAPLNNSRNSRQGGEPRHSS | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1278824 | 1282310 | + | Bpe003563.1 | Bpe11g00186 | 110331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00186 | 461 | MobiDBLite | consensus disorder prediction | 389 | 461 | - | - | |
Bpe11g00186 | 461 | SUPERFAMILY | CCCH zinc finger | 334 | 362 | IPR036855 | GO:0046872 | |
Bpe11g00186 | 461 | MobiDBLite | consensus disorder prediction | 244 | 274 | - | - | |
Bpe11g00186 | 461 | SMART | c3hfinal6 | 117 | 144 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | SMART | c3hfinal6 | 274 | 301 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | SMART | c3hfinal6 | 26 | 53 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | SMART | c3hfinal6 | 331 | 358 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | SMART | c3hfinal6 | 71 | 97 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 333 | 358 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 28 | 53 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 276 | 300 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 120 | 144 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 74 | 91 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | SUPERFAMILY | CCCH zinc finger | 30 | 54 | IPR036855 | GO:0046872 | |
Bpe11g00186 | 461 | MobiDBLite | consensus disorder prediction | 389 | 455 | - | - | |
Bpe11g00186 | 461 | ProSiteProfiles | Zinc finger C3H1-type profile. | 274 | 302 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | ProSiteProfiles | Zinc finger C3H1-type profile. | 71 | 98 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | ProSiteProfiles | Zinc finger C3H1-type profile. | 26 | 54 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | ProSiteProfiles | Zinc finger C3H1-type profile. | 117 | 145 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | ProSiteProfiles | Zinc finger C3H1-type profile. | 331 | 359 | IPR000571 | GO:0046872 | |
Bpe11g00186 | 461 | SUPERFAMILY | CCCH zinc finger | 119 | 145 | IPR036855 | GO:0046872 | |
Bpe11g00186 | 461 | PANTHER | PROTEIN PHOSPHATASE RELATED | 10 | 438 | - | - | |
Bpe11g00186 | 461 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 58 | 10 | 438 | - | - | |
Bpe11g00186 | 461 | Gene3D | - | 26 | 99 | - | - | |
Bpe11g00186 | 461 | Gene3D | - | 273 | 369 | - | - | |
Bpe11g00186 | 461 | Gene3D | - | 100 | 151 | - | - | |
Bpe11g00186 | 461 | SUPERFAMILY | CCCH zinc finger | 279 | 303 | IPR036855 | GO:0046872 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00449 | Bpe11g00186 | CCT | |
Bpe03g00449 | Bpe11g00186 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00851 | Bpe-Chr5:21716389 | Bpe11g00186 | Bpe-Chr11:1278824 | 6.83E-09 | dispersed | |
Bpe09g00685 | Bpe-Chr9:15427289 | Bpe11g00186 | Bpe-Chr11:1278824 | 1.82E-110 | dispersed | |
Bpe11g00186 | Bpe-Chr11:1278824 | Bpe13g00654 | Bpe-Chr13:13357877 | 6.75E-121 | dispersed | |
Bpe11g00186 | Bpe-Chr11:1278824 | Bpe03g00449 | Bpe-Chr3:23531545 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22010 | PF00642 | zf-CCCH | 1.50E-08 | CL0537 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00186 | - | - | cpap:110821377 | 705.286 |