Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00223 GTACAGCGGGTGGAAATCCCGGCGGCCAAGCCATTTCTGAAATCACTGAAGAACGGTCTGAAGGAGACCTTCTTCCCCGATGACCCACTTAAACAGTTCAAGAACCAACCCACCTTGAAAAAACTCAAGCTTGGGTTTCAGTACTTCTTCCCGGTCCTGGAATGGGCTCCTCGTTATAGCTTTGCTTTCTTGAAAGCAGATCTCATTGCTGGAATCACCATTGCCAGCCTAGCTATTCCGCAGGGAATCAGCTACGCCAAGCTCACTAATCTTCCTCCAATATATGGCCTGTATTCGAGCTTTGTGCCTCCATTGATATATGCGATTATGGGGAGCTCCAGGGATCTGGCCGTCGGGACAGTGGCGGTTGCGTCGCTGCTGATAGCGTCGATGTTGGGAGAGGAGGTTGATGCAAAGAAAAGTCCAGAGCTCTACATCCACCTCGCTTTCACTGCAACCTTCTTTGCCGGAGTATTCCAGGCTGCCTTGGGATTATTCAGGCTAGGTTTTGTGGTGGATTTTCTCTCGCATGCTACAATAGTGGGGTTCATGGCTGGATCAGCGGTGGTAGTGAGCCTGCAACAGCTCAAAGGCATTCTGGGCCTCGACCATTTCACTCACCACTCTGACATCGTCTCCGTTATGCGTTCTGTTTTCACCCAAACCCACCAGTGGAAATGGCAGAGTGGAGTTATAGGATGCGTCTTCCTTATTTTCCTCATCAGCACCAGATTATTCAGCAAGAGACGGCCAAAATACTTTTGGTTAGCAGCCATGGCACCTTTAATATCTGTCATTTTGGCGAGTCTTTTTGTTTTTGTCACCCATGCTGAGAGACATGGAGTGCAAGTGATAGGAACGCTGAAGAAGGGTTTAAATCCCATATCAGTTACAGATCTCATATTTGCGCCTCCTTATTTGTCTCTTGCTGTAAAAACCGGCATCATCACTGGCATTGTAGCTCTCGCAGAAGGAATAGCAGTTGGGAGAAGCTTTGCCATGTTCAAGAACTACAATATTGATGGAAACAAAGAGATGGTTGCAATTGGGACCATGAACATTGTTGGCTCTTGCACTTCTTGCTATCTTTCTACAGGGCCGTTTTCCCGCTCTGCCGTGAACTACAACGCAGGATGCAAAACGGCAGCATCGAACATTGTGATGGCAATTGCGGTTATGTTTACGTTATTGTTCTTGACACCCTTGTTCCACTACACCCCCCTCGTGGTCCTCTCTTCTATTATCATGTCCGCCATGCTTGGCCTCATCGACTACGAAGCAGCCATTCATCTCTGGAAGGTCGATAAATTTGATTTTATAATCTGTACAAGCGCATTTGCTGGTGTGGTCTTTGCCAGTGTGGAAATTGGCCTCATCATAGCTGTTGCTATATCGGTGATAAGAGTGCTTCTACTGATAGCAAGGCCGAGGACCTTTGCTCTCGGAAACATTCCAAATTCTGTGAATTATAGAAACATGGAACAATATCGAAGAGCAAATAGTGTTCCCGGCATTCTCATACTGGAAATCAATTCTCCCCTTTATTTTGCCAATTCCAATTACTTGAGAGAAAGGATTGTAAGATGGATTGATGATGAAGAAGACAGCATAAATGCTTCTGGGAACACTAGTCTGCAGTATGTTATATTGGATATGAGTGCGGTTAGCAACATCGATACGAGCGGAATAGGCATGCTCCAAGAGGTTAAGAAGATTCTTGACAGAAGGGGATTAAAGCTTGTGCTGACTAATCCTGGCGGCGAGGCCATGAAGAAGCTTCACAAAGCCAGGTTTGTCGAGAGTGTGGGGGAAGAATGGATCTTTGTTACGATCAGTGATGCCGTCAATGCCTGTAATTACATGCTCCAAAAATGCGAAACAGAATCTGGTAAAGACAAGGCAGAGGTGTGGAACAGCGTC 1920 46.41 VQRVEIPAAKPFLKSLKNGLKETFFPDDPLKQFKNQPTLKKLKLGFQYFFPVLEWAPRYSFAFLKADLIAGITIASLAIPQGISYAKLTNLPPIYGLYSSFVPPLIYAIMGSSRDLAVGTVAVASLLIASMLGEEVDAKKSPELYIHLAFTATFFAGVFQAALGLFRLGFVVDFLSHATIVGFMAGSAVVVSLQQLKGILGLDHFTHHSDIVSVMRSVFTQTHQWKWQSGVIGCVFLIFLISTRLFSKRRPKYFWLAAMAPLISVILASLFVFVTHAERHGVQVIGTLKKGLNPISVTDLIFAPPYLSLAVKTGIITGIVALAEGIAVGRSFAMFKNYNIDGNKEMVAIGTMNIVGSCTSCYLSTGPFSRSAVNYNAGCKTAASNIVMAIAVMFTLLFLTPLFHYTPLVVLSSIIMSAMLGLIDYEAAIHLWKVDKFDFIICTSAFAGVVFASVEIGLIIAVAISVIRVLLLIARPRTFALGNIPNSVNYRNMEQYRRANSVPGILILEINSPLYFANSNYLRERIVRWIDDEEDSINASGNTSLQYVILDMSAVSNIDTSGIGMLQEVKKILDRRGLKLVLTNPGGEAMKKLHKARFVESVGEEWIFVTISDAVNACNYMLQKCETESGKDKAEVWNSV 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1487296 1490591 - Bpe024743 Bpe11g00223 110368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00223 640 CDD STAS_SulP_like_sulfate_transporter 496 611 - -
Bpe11g00223 640 PANTHER SULFATE TRANSPORTER 3.1 2 635 IPR030311 GO:0008272|GO:0009507|GO:0015116
Bpe11g00223 640 Pfam STAS domain 496 614 IPR002645 -
Bpe11g00223 640 Gene3D STAS domain 475 621 IPR036513 -
Bpe11g00223 640 ProSitePatterns SLC26A transporters signature. 93 114 IPR018045 GO:0008271|GO:0008272
Bpe11g00223 640 ProSiteProfiles STAS domain profile. 495 618 IPR002645 -
Bpe11g00223 640 TIGRFAM sulP: sulfate permease 51 614 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe11g00223 640 PANTHER SULFATE TRANSPORTER 2 635 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bpe11g00223 640 Pfam Sulfate permease family 64 443 IPR011547 GO:0016021
Bpe11g00223 640 SUPERFAMILY SpoIIaa-like 501 619 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00464 Bpe-Chr8:2980340 Bpe11g00223 Bpe-Chr11:1487296 0 dispersed
Bpe10g00380 Bpe-Chr10:11379341 Bpe11g00223 Bpe-Chr11:1487296 0 dispersed
Bpe10g00996 Bpe-Chr10:15375493 Bpe11g00223 Bpe-Chr11:1487296 0 dispersed
Bpe11g00223 Bpe-Chr11:1487296 Bpe15g00107 Bpe-Chr15:10053359 0 dispersed
Bpe11g00223 Bpe-Chr11:1487296 Bpe04g00817 Bpe-Chr4:5392011 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00223 K17471 - jre:109018587 1010.75