Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00234 ATGGCTTTGGCTGGTGTCTTCTCGCCATTTCTGGCCATGGTTCTTTTGCAAGCTGGGTATGCCTTCATGAACATTACTTCTAAGCTCGCCATGGAGTCTGGTATGAACCCACTCGTTCTCGTTGCTTACCGCCAGATGTTTGCCACCCTAGCCATTGCTCCTTTTGCTTTTTTCCTGGAAAGGAAGACGAGACCCGAGATCACAATGCCTATTCTTCGCCAAATTCTGCTGTGCTCCTTAACTGGGGCAACTGGAAACCAAGTGTTGTACTTTCTTGGGTTAGAATATTCAACTCCAACGATTGCATGTGCATTGAGCAACATACTCCCGGCAGCCACTTTTATTCTTGCTTTGCTTTTCGGACAAGAATCACTGGGAATAAGGACGAGGGCTGGGGTGGCGAAGGTTGCGGGGACAATTGTGTGTGTGAGCGGAGCGATGTTGCTGTCTTTCTACCACGGCCACATAATCAACTTAGGTGAATCCAGAGTTCATTGGCATTACGCCGACAAAATGGAGAATACAAGTTCTGGCCCTCGACCCAACCAAATACTAGGCTCCATCTTGCTGCTTGTTAGCTCTGTGTCATGGGCAGGATGGTTTGTAATACAAGCTAAAGTGAATGAAAAGTTTCCAGCTCCTTACACGAGCACCGCTTTGATGTGCGCTATGGCCACAATTCAGTGCGGAGCCATTGCTGCGGGCGTCGAACACAACATCTCTGCGTGGTCTTTGGGAAGCCCCATCAGGCTTGTTGGAGCCCTTTACGCTGGAATAGTATGTTCAGGACTAGCTTATTGCGTCACTACCTGGTGCATTCAGACAGAAGGCCCTCTTTACGCCTCCGTGTTCAGTCCATTATTGCTTGTTATCGTCGCCATATTTAGCTGGTTCTTGCTCCATGAAAAATTATACGTGGGAACCGCCATAGGATCTCTTTTCATCGTGTTGGGGCTCTACGCAGTTTTGTGGGGAAAGAACAAAGAAACTAAAGCTCTAAAAAACACAGAAATAATGGCAACGAGGAAACTGGAAGAAGGAATTGATGGGGGCGAGAAGGGTGAGGTGGAATGGTACATTTACAGGTCATCAAAACTTAATCGGGGT 1107 47.7 MALAGVFSPFLAMVLLQAGYAFMNITSKLAMESGMNPLVLVAYRQMFATLAIAPFAFFLERKTRPEITMPILRQILLCSLTGATGNQVLYFLGLEYSTPTIACALSNILPAATFILALLFGQESLGIRTRAGVAKVAGTIVCVSGAMLLSFYHGHIINLGESRVHWHYADKMENTSSGPRPNQILGSILLLVSSVSWAGWFVIQAKVNEKFPAPYTSTALMCAMATIQCGAIAAGVEHNISAWSLGSPIRLVGALYAGIVCSGLAYCVTTWCIQTEGPLYASVFSPLLLVIVAIFSWFLLHEKLYVGTAIGSLFIVLGLYAVLWGKNKETKALKNTEIMATRKLEEGIDGGEKGEVEWYIYRSSKLNRG 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1567700 1569685 - Bpe024744 Bpe11g00234 110379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00234 369 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Bpe11g00234 369 Pfam EamA-like transporter family 11 148 IPR000620 GO:0016020|GO:0016021
Bpe11g00234 369 PANTHER WAT1-RELATED PROTEIN 5 338 - -
Bpe11g00234 369 PANTHER WAT1-RELATED PROTEIN 5 338 IPR030184 GO:0016021|GO:0022857
Bpe11g00234 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 143 - -
Bpe11g00234 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00234 Bpe-Chr11:1567700 Bpe11g01077 Bpe-Chr11:8086516 4.14E-82 dispersed
Bpe12g00742 Bpe-Chr12:12952907 Bpe11g00234 Bpe-Chr11:1567700 1.15E-72 dispersed
Bpe11g00234 Bpe-Chr11:1567700 Bpe15g01004 Bpe-Chr15:19548795 6.77E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00234 - - csv:101215353 468.774