Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00238 ATGGTGAAAAACATAATATCAATGAACAAAACAGACGAAACAGTCGTATGCTATGCACCATCAATGATAACCACAAATGGTATTTGGCAAGGAGACAACCCTTTGGATTATGCCCTTCCCCTCTTTGTTTTGCAGTTGACAATGGTGGTCGTCCTCACTCGCATCCTCGTTTTCCTCCTCAAACCATTCCGGCAACCTCGAGTCGTTTCAGAAATCTTGGGTGGCGTCATTTTGGGTCCTTCAGTTCTTGGGAGGAACGTGAAATTTGCCCAGGCAATATTTCCTCTCAGAAGTGTGATGGTGCTAGAAACAATGGCGAATGTGGGTCTTCTTTATTTTCTTTTCTTAGTGGGAGTGGAGATGGACCTGTCTGTAATACGTAGAACAGGTCGAAAAGCAATGGCCATAGCCATAGGAGGAATGATTCTTCCCTTCTTAATAGGAGCCTGCTTCTCCCTCATCTTTCATAGATCAGATCCCACAATGAGCAAAGGCACTTTCATTCTCTTTCTGGGCGTTGCCCTCTCTGTCACTGCATTTCCTGTTCTTGCAAGAATACTTGCAGAGCTCAAACTCATTAACACTGAGCTTGGAAGGATTGCAATGGCCTCAGCTCTTTTCAATGACATGTGTGCATGGGTACTTCTAGCCATAGCCATCGCTCTTTCAGAAAATCAAAACACTTCTTTTGCTTCACTTTGGGTCATTTTATCAAGTGCAGCCTTCGTTTCCTTCTCCATCTTGGTCATTCGGCCCGCCATTGCCTGGATAATTAGACGGACGCCTGAGGGTGAGCCGTTCAGCGAGTTCCACATCTGTCTAATTCTCACCGGTGTAATGGTCTCGGGGTTTATTACGGACGCGATCGGAACGCATTCGGTTTTTGGTGCGTTTGTGTTTGGTCTGATTATTCCGAACGGACCACTTGGGGTGACGTTGATAGAGAAACTTGAGGATTTTGTTTCAGGGCTTTTACTCCCTCTCTTCTTTGCCATTAGTGGGCTTAAGACAGATGTAACCACCATCAAAGGACCTGGGACTTGGGGAATATTGCTTCTTGTCATCGTTCTTGCTTGTGGGGGTAAAGTTGCAGGCACTCTCTTGGTTTCCCTTTTCTATCAGATGCCTTACAACGAAGGAGTTTCTCTTGGTTTGCTTATGAACACCAAAGGCCTCATCGAGATGATCATCCTTAACGTTGGAAGAGACCACAAGGTGTTAGATGATCAGTCATTTGCGATAATGGTAATAGTGGCAGTGGTAATGACAGGGATAATAACCCCAATCGTGACTGCAATTTACAAGCCAGCGAGAAGGTTCATACCCTACAAAAAGAGGACAATTCAGAGGTCCAAACCGGATTCGGAGCTCAGGATCTTAGTTTGTATTCACACCCCTAGAAATGTACCGACAATCATCAATCTCCTCGAAGCCTCAAATCCAACCAAAAGATCCCCTATTTGCATCTACGTCCTCCACCTGGTCGAGCTCACAGGTCGAGCCTCTGCCATGCTCATCGTCCACAACACCCACAAATCAGGCCGCGCCTCCCACAACCGGACCCAGGCTCAGTCTGACCACATAATCAACGCCTTCGAGAACTACGAGCAGCATGCCAGCTGCGTTTCAGTGCAGCCTCTCACTGCCATTTCTCCCTATTCCACCATGCATGAAGACATATGCAACTTGGCAGAAGATAAGAGAGTGGCATTCATCATCATTCCATTTCATAAGCAGCAGACTGTGGATGGAGGAATGGAAGCGACAAACCCTGCTTTCCGAACTGTGAACCAGAATGTGCTAGCCAATGCACCTTGCTCGGTGGGGATTTTGGTTGATCGAGGCTTGAGTGGCTCGAGTAGGTTGGCTCCTAATCAGGTCTCCCACAATGTTGTGGTTCTCTTCTTTGGTGGTCAAGACGACAGAGAAGCTCTCTCGTACGCATGGCGGATGTCGGAGCATCCAGGAGTTAGCCTAAGTTTGATGCGGTTTGTCGCCGGAAAAGATTCGTCGGAGCCTTCGAGGCATCCCGAAATGAACTCAAATGACCCGAGAGTCCTTACAGTTGCTACAGAGGTGGAAAAAGAAAAGCAACTGGACGAAGAGTTGTTAAGCGAATTCAGGATGAAAACTATAAGCAACGAGTCAATTGTGTATACGGAGAAAGTGGTCAACAATGGGGAAGAAACAGTGGCATCAATACGATCAATGAACAACATTCATGATTTGTTCATAGTCGGGAGAGGGCAAGGGGTGGTGTCGCCTCTCACGGCTGGGCTGACAGACTGGAGCGAGTGTCCGGAGCTGGGCGCCATTGGAGACTTGCTTGCGTCCTCTGATTTTGCAGCCACTGCTTCGGTGTTGGTGGTGCAGCAATACATTGGAGCTGGGCCACATGGTGAAGGAGTAGGGACCCCTGATAGCCCTGTCCACCAAGTTAATGAGCACTTCAACAACTCATGGCAGATGAATTCCAGGCCTCAACCTGTCTTCTCCAAATGA 2502 47.64 MVKNIISMNKTDETVVCYAPSMITTNGIWQGDNPLDYALPLFVLQLTMVVVLTRILVFLLKPFRQPRVVSEILGGVILGPSVLGRNVKFAQAIFPLRSVMVLETMANVGLLYFLFLVGVEMDLSVIRRTGRKAMAIAIGGMILPFLIGACFSLIFHRSDPTMSKGTFILFLGVALSVTAFPVLARILAELKLINTELGRIAMASALFNDMCAWVLLAIAIALSENQNTSFASLWVILSSAAFVSFSILVIRPAIAWIIRRTPEGEPFSEFHICLILTGVMVSGFITDAIGTHSVFGAFVFGLIIPNGPLGVTLIEKLEDFVSGLLLPLFFAISGLKTDVTTIKGPGTWGILLLVIVLACGGKVAGTLLVSLFYQMPYNEGVSLGLLMNTKGLIEMIILNVGRDHKVLDDQSFAIMVIVAVVMTGIITPIVTAIYKPARRFIPYKKRTIQRSKPDSELRILVCIHTPRNVPTIINLLEASNPTKRSPICIYVLHLVELTGRASAMLIVHNTHKSGRASHNRTQAQSDHIINAFENYEQHASCVSVQPLTAISPYSTMHEDICNLAEDKRVAFIIIPFHKQQTVDGGMEATNPAFRTVNQNVLANAPCSVGILVDRGLSGSSRLAPNQVSHNVVVLFFGGQDDREALSYAWRMSEHPGVSLSLMRFVAGKDSSEPSRHPEMNSNDPRVLTVATEVEKEKQLDEELLSEFRMKTISNESIVYTEKVVNNGEETVASIRSMNNIHDLFIVGRGQGVVSPLTAGLTDWSECPELGAIGDLLASSDFAATASVLVVQQYIGAGPHGEGVGTPDSPVHQVNEHFNNSWQMNSRPQPVFSK 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1630882 1633806 + Bpe003612.1 Bpe11g00238 110383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00238 833 Gene3D - 41 439 IPR038770 -
Bpe11g00238 833 Gene3D - 477 760 - -
Bpe11g00238 833 PANTHER CATION/H+ EXCHANGER 3 11 814 - -
Bpe11g00238 833 PANTHER CATION/H + ANTIPORTER 11 814 - -
Bpe11g00238 833 Pfam Sodium/hydrogen exchanger family 49 431 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01948 Bpe-Chr2:21415740 Bpe11g00238 Bpe-Chr11:1630882 0 dispersed
Bpe03g00563 Bpe-Chr3:25906826 Bpe11g00238 Bpe-Chr11:1630882 0 dispersed
Bpe04g01791 Bpe-Chr4:23408435 Bpe11g00238 Bpe-Chr11:1630882 3.86E-178 dispersed
Bpe07g00084 Bpe-Chr7:622519 Bpe11g00238 Bpe-Chr11:1630882 0 dispersed
Bpe08g00865 Bpe-Chr8:11023633 Bpe11g00238 Bpe-Chr11:1630882 9.95E-134 dispersed
Bpe08g01413 Bpe-Chr8:14957618 Bpe11g00238 Bpe-Chr11:1630882 0 dispersed
Bpe10g00541 Bpe-Chr10:12467726 Bpe11g00238 Bpe-Chr11:1630882 4.26E-131 dispersed
Bpe11g00238 Bpe-Chr11:1630882 Bpe15g01187 Bpe-Chr15:20691976 0 dispersed
Bpe13g00937 Bpe-Chr13:15260789 Bpe11g00238 Bpe-Chr11:1630882 1.75E-09 dispersed
Bpe15g01180 Bpe-Chr15:20660136 Bpe11g00238 Bpe-Chr11:1630882 4.71E-160 dispersed
Bpe15g01181 Bpe-Chr15:20663564 Bpe11g00238 Bpe-Chr11:1630882 2.34E-170 dispersed
Bpe15g01395 Bpe-Chr15:21842403 Bpe11g00238 Bpe-Chr11:1630882 4.18E-154 dispersed
Bpe11g00238 Bpe-Chr11:1630882 Bpe04g00795 Bpe-Chr4:5190426 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00238 - - pvy:116140351 1317.75