Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00259 | ATAATGTCATCCTCTTCTACTCCTACCTTGACTCAGCTGGACCACCTTCCTCCCTCGGAGCAGCTCTGCTACGTCCATTGTAACATATGTGACACTGTCTTAGCGGTGAGCGTTCCTTGCACCAGTTTGTTCAAGACTGTGACAGTTCGATGCGGCCATTGCACCAACCTCCTACCAGGTCTTCTTCTTCCTTCCAACAACCAGTTTCACCAGCTGAGCCACCCTCTCTTTTCACCCTCCCATAACTTTCTGGAAGAGATCCCCAATGTAACTCCAAATTTTCTGATCAACCAGAGCATTGCAACTGATTTTGTCATGCCCTCTCGAGGGGTTATGAACGAGCTTCCAAGACCTCCAGCTATAAACAGACCTCCAGAGAAAAGACAGAGAGTTCCTTCTGCATATAATCGCTTCATCAAGGATGAGATTCAACGCATCAAGTCTGTGAATCCAGATATATCACACAGAGAAGCGTTCAGCGCAGCTGCTAAAAATTGGGCCCACTTTCCGCACATTCACTTTGGTCTCATGCCCGACCAGACAATGAAGAAGACAACCATGCGCCAACAGGAAGGAGATGATGTTTTGATGAAAGACGGGTTTTTCGCTGCAGCGAACATGGGTATGTCCCACTTTTGA | 639 | 47.57 | IMSSSSTPTLTQLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPGLLLPSNNQFHQLSHPLFSPSHNFLEEIPNVTPNFLINQSIATDFVMPSRGVMNELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTTMRQQEGDDVLMKDGFFAAANMGMSHF | 212 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1881777 | 1883932 | + | Bpe003635.1 | Bpe11g00259 | 110404 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00259 | 212 | PANTHER | PROTEIN YABBY 4 | 2 | 210 | - | - | |
Bpe11g00259 | 212 | PANTHER | PROTEIN YABBY 6-RELATED | 2 | 210 | IPR006780 | GO:0007275 | |
Bpe11g00259 | 212 | Gene3D | High mobility group box domain | 119 | 186 | IPR036910 | - | |
Bpe11g00259 | 212 | SUPERFAMILY | HMG-box | 121 | 169 | IPR036910 | - | |
Bpe11g00259 | 212 | Pfam | YABBY protein | 18 | 176 | IPR006780 | GO:0007275 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe05g00592 | Bpe11g00259 | CCT | |
Bpe07g00159 | Bpe11g00259 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g01012 | Bpe-Chr4:7094515 | Bpe11g00259 | Bpe-Chr11:1881777 | 5.96E-71 | dispersed | |
Bpe05g01079 | Bpe-Chr5:23283427 | Bpe11g00259 | Bpe-Chr11:1881777 | 2.48E-94 | dispersed | |
Bpe13g01366 | Bpe-Chr13:18891140 | Bpe11g00259 | Bpe-Chr11:1881777 | 1.24E-42 | transposed | |
Bpe11g00259 | Bpe-Chr11:1881777 | Bpe05g00592 | Bpe-Chr5:19976884 | 4.38E-108 | wgd | |
Bpe11g00259 | Bpe-Chr11:1881777 | Bpe07g00159 | Bpe-Chr7:1098565 | 2.27E-100 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22016 | PF04690 | YABBY | 3.00E-65 | CL0114 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00259 | K25796 | - | jre:109011373 | 345.895 |