Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00259 ATAATGTCATCCTCTTCTACTCCTACCTTGACTCAGCTGGACCACCTTCCTCCCTCGGAGCAGCTCTGCTACGTCCATTGTAACATATGTGACACTGTCTTAGCGGTGAGCGTTCCTTGCACCAGTTTGTTCAAGACTGTGACAGTTCGATGCGGCCATTGCACCAACCTCCTACCAGGTCTTCTTCTTCCTTCCAACAACCAGTTTCACCAGCTGAGCCACCCTCTCTTTTCACCCTCCCATAACTTTCTGGAAGAGATCCCCAATGTAACTCCAAATTTTCTGATCAACCAGAGCATTGCAACTGATTTTGTCATGCCCTCTCGAGGGGTTATGAACGAGCTTCCAAGACCTCCAGCTATAAACAGACCTCCAGAGAAAAGACAGAGAGTTCCTTCTGCATATAATCGCTTCATCAAGGATGAGATTCAACGCATCAAGTCTGTGAATCCAGATATATCACACAGAGAAGCGTTCAGCGCAGCTGCTAAAAATTGGGCCCACTTTCCGCACATTCACTTTGGTCTCATGCCCGACCAGACAATGAAGAAGACAACCATGCGCCAACAGGAAGGAGATGATGTTTTGATGAAAGACGGGTTTTTCGCTGCAGCGAACATGGGTATGTCCCACTTTTGA 639 47.57 IMSSSSTPTLTQLDHLPPSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCTNLLPGLLLPSNNQFHQLSHPLFSPSHNFLEEIPNVTPNFLINQSIATDFVMPSRGVMNELPRPPAINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPDQTMKKTTMRQQEGDDVLMKDGFFAAANMGMSHF 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1881777 1883932 + Bpe003635.1 Bpe11g00259 110404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00259 212 PANTHER PROTEIN YABBY 4 2 210 - -
Bpe11g00259 212 PANTHER PROTEIN YABBY 6-RELATED 2 210 IPR006780 GO:0007275
Bpe11g00259 212 Gene3D High mobility group box domain 119 186 IPR036910 -
Bpe11g00259 212 SUPERFAMILY HMG-box 121 169 IPR036910 -
Bpe11g00259 212 Pfam YABBY protein 18 176 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00592 Bpe11g00259 CCT
Bpe07g00159 Bpe11g00259 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01012 Bpe-Chr4:7094515 Bpe11g00259 Bpe-Chr11:1881777 5.96E-71 dispersed
Bpe05g01079 Bpe-Chr5:23283427 Bpe11g00259 Bpe-Chr11:1881777 2.48E-94 dispersed
Bpe13g01366 Bpe-Chr13:18891140 Bpe11g00259 Bpe-Chr11:1881777 1.24E-42 transposed
Bpe11g00259 Bpe-Chr11:1881777 Bpe05g00592 Bpe-Chr5:19976884 4.38E-108 wgd
Bpe11g00259 Bpe-Chr11:1881777 Bpe07g00159 Bpe-Chr7:1098565 2.27E-100 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22016 PF04690 YABBY 3.00E-65 CL0114 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00259 K25796 - jre:109011373 345.895