Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00296 ATGGATAAAACAACTAAAGAGGAGTTGAAGACAACGCCTGCTTCCACGCAGGAGCAATCCCCAACTACGAGCAGTGGTGCAGTTAATCCTGACTGGTCAGGATTTCAGGCTTATTCTCCTATGCCTCCTCATGGGTTCTTGGCATCCAGTCCTCAAGCTCATCCATATATGTGGGGGGTTCAGCATATAATGCCTCCCTATGGCACTCCTCCCTATGTTGCTATGTATCCCCACGGTGGCATATATGCTCATCCATCTATTCCTCCGGGTCCATATCCTTTTAGTCCTTTTGCTGCTCCTTCTCCAAATGGCATCACTGAAGCTTCTGGAAATACACAGGGTAGATTGGATACAGATGTCAAACACCCGGATGCAAAGGAAAAGTTACCCATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTGAATATGATTACTGGGAAGCATAATGAGCTTGGTAAAATGTCAGGAACATCTGCTAATGGCATATACTCTAAAAGTGCTGATAGTGCAAGTGAAGGTACAAGTGACGGAAGCGATGACAATTCTGACAATGATTCACAATTGAAGACAAGTCATGGACAAGACTCCTTGGAAGCCGCGACATTTCAAAATGGCAGTTCTGTGCATGGTGCTAAGAATGGAGGACCAAATGGAACTTCAATGGCAAATCAGTCAATGGCCATCATACCAGCTGCTGGAGTACCTGGGTCTGTAACTGGTCCCACTACTATCTTAAACATAGGAATGGACTACTGGGGGGCTCCAACTTCTTCCGCCATCCCTCCTGCCTTGAAGGCAAATCCAGTTGCTACTGGATCACGGGATCAGTCTCAGCATTGGTTGCAGGATGAGCGAGAGCAAAAGCGACAGAGACGGAAACAATCAAACCGAGAATCTGCTCGTAGATCGCGGCTGCGGAAGCAGGCGGAATGTGACGAACTGGCTCAACGAGCTGAAGTACTTAAAGATGAAAATGCCAACCTCAGATCCGAAGTGAATCGAATCAGAAGCGAGTATGAGCAACTTCTCTTGGAGAATTCCTCACTCAAGGAAAGATTAGTGGAAGTTCCCGAAAAGGAGCCGACAAAGTTGAGCGATGAAAAGAAACAAACTACGCAGTCGGAGCTCTCGAAAGGGGGTAATTAA 1146 46.51 MDKTTKEELKTTPASTQEQSPTTSSGAVNPDWSGFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPYVAMYPHGGIYAHPSIPPGPYPFSPFAAPSPNGITEASGNTQGRLDTDVKHPDAKEKLPIKRSKGSLGSLNMITGKHNELGKMSGTSANGIYSKSADSASEGTSDGSDDNSDNDSQLKTSHGQDSLEAATFQNGSSVHGAKNGGPNGTSMANQSMAIIPAAGVPGSVTGPTTILNIGMDYWGAPTSSAIPPALKANPVATGSRDQSQHWLQDEREQKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKDENANLRSEVNRIRSEYEQLLLENSSLKERLVEVPEKEPTKLSDEKKQTTQSELSKGGN 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2164892 2169672 - Bpe003671.1 Bpe11g00296 110441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00296 381 Gene3D - 286 341 - -
Bpe11g00296 381 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 286 349 IPR004827 GO:0003700|GO:0006355
Bpe11g00296 381 MobiDBLite consensus disorder prediction 351 373 - -
Bpe11g00296 381 SUPERFAMILY Leucine zipper domain 288 342 IPR046347 GO:0003700|GO:0006355
Bpe11g00296 381 Coils Coil 304 352 - -
Bpe11g00296 381 MobiDBLite consensus disorder prediction 151 181 - -
Bpe11g00296 381 CDD bZIP_plant_GBF1 289 339 IPR045314 GO:0003700|GO:0006355
Bpe11g00296 381 MobiDBLite consensus disorder prediction 10 32 - -
Bpe11g00296 381 Pfam bZIP transcription factor 284 346 IPR004827 GO:0003700|GO:0006355
Bpe11g00296 381 MobiDBLite consensus disorder prediction 203 222 - -
Bpe11g00296 381 Pfam G-box binding protein MFMR 4 88 IPR012900 -
Bpe11g00296 381 MobiDBLite consensus disorder prediction 350 381 - -
Bpe11g00296 381 MobiDBLite consensus disorder prediction 262 307 - -
Bpe11g00296 381 PANTHER G-BOX-BINDING FACTOR 3-RELATED 2 371 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bpe11g00296 381 MobiDBLite consensus disorder prediction 109 193 - -
Bpe11g00296 381 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 291 306 IPR004827 GO:0003700|GO:0006355
Bpe11g00296 381 MobiDBLite consensus disorder prediction 1 36 - -
Bpe11g00296 381 Pfam Disordered region downstream of MFMR 127 261 - -
Bpe11g00296 381 SMART brlzneu 284 348 IPR004827 GO:0003700|GO:0006355
Bpe11g00296 381 MobiDBLite consensus disorder prediction 278 293 - -
Bpe11g00296 381 MobiDBLite consensus disorder prediction 117 133 - -
Bpe11g00296 381 PANTHER BZIP TRANSCRIPTION FACTOR 68 2 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00053 Bpe-Chr6:631164 Bpe11g00296 Bpe-Chr11:2164892 8.92E-55 dispersed
Bpe11g00296 Bpe-Chr11:2164892 Bpe13g00969 Bpe-Chr13:15522413 5.54E-45 dispersed
Bpe11g00296 Bpe-Chr11:2164892 Bpe10g00107 Bpe-Chr10:1859362 1.04E-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22019 PF16596 MFMR_assoc 2.30E-49 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00296 K09060 - fve:101292506 488.419