Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00336 ATGACGGACTATGGATTATCGACGATGGCGATGAATCTATGGACGGACGAGAATGGGTCGGTGATGGACGCCTTTTTGAATTCTGATCTTTCTTCTTTCTGGGCTCCGCCACCTCAGAACCAGCCTTCCTCCGCTTCTACATCTGCTCCTCTCTCCCAATCCCAGCCGTCTGCGTTGGTTTTCTCCCAGGAGAGCCTGCAGCAACGTCTGCAGGCGGTGATCGAGGGTGCTCGCGAGAGCTGGACGTACGCGATATTCTGGCAGCCCTCTTACGATTACTCCGGCCCGTCGATTTTAGGGTGGGGTGATGGGTATTACAAAGGGGATGAAGGAAAGGGAGCGGCCAGACCCAATGCTCCCACTTCTGCTGCGGAGCAGGAGCACCGGAGAAAAGTTCTTCGGGAGCTCAACTCACTGATTTCAGGCTCCGCCGCCGCTTCAGACGACCCTGTCGATGAAGTCGTCACCGACACCGAGTGGTTCTTCTTAGTTTCGATGACCCAATCTTTCGTCAACGGCAGTGGATTGCCCGGTCAGGCTTTGCTCAGTTCCCGGCCGGTGTGGGTTTCAGGCCCTGACCGCCTGGCGACGTCTACCTGCGAACGGGCTCGGCAGGCTCAGGCCTTCGGGTTGCAGACGATGGTATGTATACCCTCTCCTAACGGAGTGGTTGAATTGGGGTCGACGGAGGTCATTTTGCAGAGCGCCGATCTGACGAATAAAGTAAGGGTTTTGTTCAATTTCAACAATCTGGAAGTTGGTTCGTGGCCCTTGGACAGTGCTGACCAAGCTGAAATGGACCCATCTTCTCTCTGGCTGAACGATCCATCTGAAATTAAGGAACCGGCGAACTCAATCCCATCTTCAATGGCTCCAGCCTCAACTACACAGGAACCTTCAAAGCCAATCCACATCGAAAATCGAAGGTCATCGGAGAATCCATCCAACCCACAATCGCCTCGGATGCAGACGCAGACCTTCTTCGCCAGAGAATTGAATTTCTCCAGCTACGGATGCAAGCCGGAATCCGGCGAGATTCTCAACTTTGGTGAAAGTAAAAGGAGTTCTTATGAAAACGGCAGCTTGTTCTCCGCCCATTCTCAGATCATTCCCGAGGAGCCCGTGAAGAAGAAGAGATCGCCTGGTTCTCGGGGAAGTAACGACGATGGGATGCTGTCGTTTACTTCCGGCGTGATTTTGCCATCTTCTGGCGGGAAATCAAGTGGATGCGGACTGGAATCAGACCATTCCGATCTCGAAGCTTCAGTGGTTCGTGAAGCAGACAGTAGCCGAGTAGTAGAACCAGAGAAGAAGCCTCGAAAACGAGGAAGAAAACCAGCAAACGGAAGAGAAGAGCCATTAAATCACGTCGAAGCAGAACGACAGAGAAGAGAGAAGCTAAACCAGAGATTCTACGCTCTCAGAGCTGTAGTTCCAAACGTGTCGAAAATGGACAAAGCTTCCCTTCTCGGCGACGCCATTTCTTACATCGACGAGCTCAAATCCAAGCTTCAAACTTCAGAATCAGAAAACGAAGAATTGCAGGCACAGTTAGATTCATTGAACAAGGATTTGGCCAGCAAAGAAAATCGCTACACAAGATCAAAACAAGATCAAGAACTGAAGATATCAAATCAAAATGGAGGTAAACTTTCCGAAATTGACATTGATGTAAAAATTCTGGGTTGGGACGCCATGATCCGAATTCAATGCAGTAAGAAAAACCATCCAGCTGCTACGTTAATGGCGGCTCTAAAGGAATTACACTTGGAAGTTCACCATGCGAGCATGTCAGTGGTGAATAACTTGATGATTCAACAAGCGACAGTGAAGATGGGGAGTAGATTTTACACTCAAGAACAGCTCAAAAATGCTCTGTCGTCAAAATTTAGCGATTCCCGATGA 1905 49.92 MTDYGLSTMAMNLWTDENGSVMDAFLNSDLSSFWAPPPQNQPSSASTSAPLSQSQPSALVFSQESLQQRLQAVIEGARESWTYAIFWQPSYDYSGPSILGWGDGYYKGDEGKGAARPNAPTSAAEQEHRRKVLRELNSLISGSAAASDDPVDEVVTDTEWFFLVSMTQSFVNGSGLPGQALLSSRPVWVSGPDRLATSTCERARQAQAFGLQTMVCIPSPNGVVELGSTEVILQSADLTNKVRVLFNFNNLEVGSWPLDSADQAEMDPSSLWLNDPSEIKEPANSIPSSMAPASTTQEPSKPIHIENRRSSENPSNPQSPRMQTQTFFARELNFSSYGCKPESGEILNFGESKRSSYENGSLFSAHSQIIPEEPVKKKRSPGSRGSNDDGMLSFTSGVILPSSGGKSSGCGLESDHSDLEASVVREADSSRVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYIDELKSKLQTSESENEELQAQLDSLNKDLASKENRYTRSKQDQELKISNQNGGKLSEIDIDVKILGWDAMIRIQCSKKNHPAATLMAALKELHLEVHHASMSVVNNLMIQQATVKMGSRFYTQEQLKNALSSKFSDSR 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2441302 2443206 + Bpe003710.1 Bpe11g00336 110481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00336 634 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 454 522 IPR036638 GO:0046983
Bpe11g00336 634 MobiDBLite consensus disorder prediction 418 461 - -
Bpe11g00336 634 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 66 246 IPR025610 -
Bpe11g00336 634 SMART finulus 457 506 IPR011598 GO:0046983
Bpe11g00336 634 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 451 500 IPR011598 GO:0046983
Bpe11g00336 634 MobiDBLite consensus disorder prediction 281 301 - -
Bpe11g00336 634 MobiDBLite consensus disorder prediction 386 410 - -
Bpe11g00336 634 CDD bHLH_AtAIB_like 448 523 - -
Bpe11g00336 634 Pfam Helix-loop-helix DNA-binding domain 455 500 IPR011598 GO:0046983
Bpe11g00336 634 MobiDBLite consensus disorder prediction 364 461 - -
Bpe11g00336 634 PANTHER TRANSCRIPTION FACTOR MYC2 3 630 - -
Bpe11g00336 634 Gene3D - 443 532 IPR036638 GO:0046983
Bpe11g00336 634 PANTHER MYC 3 630 IPR045084 GO:0003700|GO:0006355
Bpe11g00336 634 MobiDBLite consensus disorder prediction 267 322 - -
Bpe11g00336 634 Coils Coil 497 538 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g00833 Bpe11g00336 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00951 Bpe-Chr4:6409780 Bpe11g00336 Bpe-Chr11:2441302 1.11E-76 dispersed
Bpe05g00647 Bpe-Chr5:20283349 Bpe11g00336 Bpe-Chr11:2441302 1.30E-14 dispersed
Bpe05g01036 Bpe-Chr5:22940432 Bpe11g00336 Bpe-Chr11:2441302 7.09E-74 dispersed
Bpe08g00900 Bpe-Chr8:11410234 Bpe11g00336 Bpe-Chr11:2441302 4.74E-43 dispersed
Bpe10g00029 Bpe-Chr10:415172 Bpe11g00336 Bpe-Chr11:2441302 4.52E-18 dispersed
Bpe11g00336 Bpe-Chr11:2441302 Bpe14g00942 Bpe-Chr14:7021042 3.29E-27 dispersed
Bpe14g00694 Bpe-Chr14:5450124 Bpe11g00336 Bpe-Chr11:2441302 8.19E-08 dispersed
Bpe14g00842 Bpe-Chr14:6318173 Bpe11g00336 Bpe-Chr11:2441302 1.51E-13 dispersed
Bpe07g00211 Bpe-Chr7:1471440 Bpe11g00336 Bpe-Chr11:2441302 0 transposed
Bpe11g00336 Bpe-Chr11:2441302 Bpe08g00833 Bpe-Chr8:10483940 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22027 PF14215 bHLH-MYC_N 2.30E-54 CL0161 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00336 K13422 - vvi:100250607 816.609