Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00343 ATGGATCTACGCGAAGTTCCGCCTCCGCCACCTTCTGCAGCATCAAATATGATGGTTGGAGTTGGACCCAACCCGTACCCGACTTCCATGTCGAACTCGAATAATGCTATGATGGGCCATAATTCGACTGCAGCTCACATGATGTCTCCCGCTTCTCGGTTTCCGTTCAACTCTGTGATCAATCCTGTGTCGAAACCTTTAGATTCGCAAAGTCCTAGTCTTTTTGAAGGTTCCCCGCCGGGATTGCGTGCCGGTGGGTTTAACATTGAGACGGAGAAGAAAAAGAGGGGACGACCTAGGAAGTACTCGCCGGACGGTAACATTGCTTTGGGATTATCGCCTACTCCAGTGGGTCAGGGGAATTCCAGTGGCACTCCATTTTCGGAGCCACCGGGGAAGAAGAACAGAGGCAGGCCGCCCGGCTCCGGAAAGAAGCAAATGGACGCTTTGGGTAGGACGGGTGGAGTTGGTTTTACTCCCCATGTTATCCTGGTGAATCCTGGAGAGGAATTTTCATCAGAAAATATGTCTAGTAAATCCGTTGTATGGTTTCAGGATATAGCATCCAAAATCATGGCCTTTTCTGAGCAAGGTCCAAGAACCATCTGTGTTCTCTCCGCGTACGGTGCAGTCTGCAATGTCACACTTTGTCAACCGGCTTCTTCTGGTGGCACTATGAGCTATGAGGGGAAATATGAACTTATTTCTCTATCGGGTTCCTACTTGTTTGCTGAAAATCATGGTAGTCGGAGGCGGTCCGGTGGCCTGAGTGTGATCCTGGCCGGAGCAGATGGCCAAGTTCTTGGCGGTGGAGTTACCGGAATATTACTGGCTGCAACTCAAGTACAGGTTATTGTGGGGAGCTTTATGGTGGATGAGAAAAAAACGAACTCAAGTATTCTGAAATCTAGCTCGTCTTCCGCCCCACCCCAGATGCTAACCTTTGGCACGCAAGGGACGGCGTCGGCTGCCAGCCCATCCTCACAAATGGCTTCCAGTGATTCATCTGACGAAAATCCGAGCAGCCCTCTCAACCCCCCAGTCATTTACAACAACGCCACCCAACCGAACCAAAATAACCTGCAAATGTATCGATTATGGGCAGACCAAATGCAACACTAA 1122 50.18 MDLREVPPPPPSAASNMMVGVGPNPYPTSMSNSNNAMMGHNSTAAHMMSPASRFPFNSVINPVSKPLDSQSPSLFEGSPPGLRAGGFNIETEKKKRGRPRKYSPDGNIALGLSPTPVGQGNSSGTPFSEPPGKKNRGRPPGSGKKQMDALGRTGGVGFTPHVILVNPGEEFSSENMSSKSVVWFQDIASKIMAFSEQGPRTICVLSAYGAVCNVTLCQPASSGGTMSYEGKYELISLSGSYLFAENHGSRRRSGGLSVILAGADGQVLGGGVTGILLAATQVQVIVGSFMVDEKKTNSSILKSSSSSAPPQMLTFGTQGTASAASPSSQMASSDSSDENPSSPLNPPVIYNNATQPNQNNLQMYRLWADQMQH 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2474577 2478221 + Bpe003717.1 Bpe11g00343 110488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00343 373 CDD DUF296 159 289 IPR005175 -
Bpe11g00343 373 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 48 341 IPR039605 GO:0003680
Bpe11g00343 373 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 48 341 - -
Bpe11g00343 373 MobiDBLite consensus disorder prediction 300 355 - -
Bpe11g00343 373 MobiDBLite consensus disorder prediction 114 129 - -
Bpe11g00343 373 MobiDBLite consensus disorder prediction 65 148 - -
Bpe11g00343 373 Pfam Plants and Prokaryotes Conserved (PCC) domain 185 289 IPR005175 -
Bpe11g00343 373 Gene3D - 185 305 - -
Bpe11g00343 373 SUPERFAMILY AF0104/ALDC/Ptd012-like 185 290 - -
Bpe11g00343 373 ProSiteProfiles PPC domain profile profile. 171 310 IPR005175 -
Bpe11g00343 373 SMART AT_hook_2 93 105 IPR017956 GO:0003677
Bpe11g00343 373 SMART AT_hook_2 133 145 IPR017956 GO:0003677
Bpe11g00343 373 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00343 Bpe-Chr11:2474577 Bpe14g00976 Bpe-Chr14:7213974 8.58E-62 dispersed
Bpe11g00343 Bpe-Chr11:2474577 Bpe08g00843 Bpe-Chr8:10724681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00343 - - zju:107430497 359.762