Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00361 ATGAAGCATAAAGATGGCAAACCAGGGCCTAATTCAGATAAAACTGCAAAAGTAGTTCCCATGGCACTTCTGATTGTTGTGTTATGTGGGTTTTCATTTTATCTTGGTGGGATATTTTGTTCTGAGAATGAAAGATACAATAACAAAATCGCCATTGATGAGCTTCCTAAATCGGCCAAATCTTCAAAGGAATTGTCGATTTCTCCTCTCCGAGTTAAATCCACTGCCTTTCTTGAATGTAGCCGTGACTACCAAGATTACACTCCTTGCACCGATCCAAAGAGATGGAAAAAATACGGCACCCATCGGTTAACATTCATGGAGCGCCATTGTCCACCTGCATTCGAGAGGAAAGAATGCCTGATTCCACCCCCGGATGGGTATAAACCCCCCATCAGGTGGCCGAAGAGCCGAGACGAATGTTGGTATAGGAACGTGCCGTATGATTGGATCAATAAGCAAAAGTCTAACCAAAATTGGCTTAGGAAAGAAGGCGACAAGTTCCACTTTCCCGGCGGTGGCACGATGTTTCCGAGAGGCGTCGGCGAGTATGTCGATTTTATGCAAGATCTCATACCGGGTATGAAAGATGGAAGTGTTCGAACTGCCATCGATACTGGTTGCGGGGTTGCAAGTTGGGGAGGCGATCTACTAGATCGAGGAGTCTTGACAGTTTCTCTTGCGCCAAGGGATAACCACGAAGCTCAAGTCCAGTTTGCTTTGGAGCGCGGTATTCCGGCAATCCTCGGCATTATTTCAACGCAAAGACTTCCTTTTCCGTCAGGCGCATTCGATATGGCTCATTGCTCAAGATGCCTTATCCCATGGACTGAATTTGGAGGGATATACTTACTAGAAATTGGCCGGATTCTTCGACCGGGAGGCTTTTGGGTATTGTCAGGCCCGCCAATCAACTACGAAAGTCACTGGCGAGGTTGGAACACAACGGTAGAAGAACAGAAAGGAGACTACGATAAGTTACAAAAACTACTAACCTCGATGTGCTTCAAATTATACGCGAAAAAAGATGATATAGCGGTTTGGCAGAAAACAACCGATAATAGTTGCTATGAAAAGCTAGCCGTACCCGACGCCTACCCACCAAAATGCGATGACAGCATCGAGCCTGATTCGGCATGGTATACTCCGTTGAGAGGCTGTGTGGTGGTTCCGAATTCAAATCTGAAGAAATCAAGCTTGACCGCGGTACCCAAATGGCCGGCACGGCTCCATATTGCACCCGAACGGATCGGAGATATTCACGGTGGGAGTATTAGTTCTTTTAAGCATGACGATAGTAAGTGGAAGGTTCGGGTCAAGCACTACAAAAAGTTGCTCCCTGCTATTGGAACTGATAAGATAAGAAATGTTATGGACATGAATACCGTTTATGGAGGTTTTGCTGCCTCCATTATCGACGATCCTTTGTGGGTGATGAACGTTGTTTCTTCCTACGCTGCCAATACGCTGGCCGTTGTCTATGATCGGGGTCTGATTGGAACTTATCACGACTGGTGCGAGGCTTTTTCGACGTATCCTCGAACCTATGATCTCCTCCACCTTGACGGCCTCTTCACGGCAGAAAACCACAGATGCGAGATGAAGTACGTGCTGTTGGAGATGGACCGGATCCTTCGTCCAAGCGGGTACGTAATAATTCGGGAATCAAGCTATTATGTGGACGCCATAGCCGCAATTGGCAAGGAAATGCGATGGGGCTGTCGGAAAGAACAAACAGAATACGAAATTGAAAACGAGAAGATTCTCATCTGCCAGAAGAAACTCTGGTACCCGTCTAATCCCAGCGCCAGATGA 1815 46.83 MKHKDGKPGPNSDKTAKVVPMALLIVVLCGFSFYLGGIFCSENERYNNKIAIDELPKSAKSSKELSISPLRVKSTAFLECSRDYQDYTPCTDPKRWKKYGTHRLTFMERHCPPAFERKECLIPPPDGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQNWLRKEGDKFHFPGGGTMFPRGVGEYVDFMQDLIPGMKDGSVRTAIDTGCGVASWGGDLLDRGVLTVSLAPRDNHEAQVQFALERGIPAILGIISTQRLPFPSGAFDMAHCSRCLIPWTEFGGIYLLEIGRILRPGGFWVLSGPPINYESHWRGWNTTVEEQKGDYDKLQKLLTSMCFKLYAKKDDIAVWQKTTDNSCYEKLAVPDAYPPKCDDSIEPDSAWYTPLRGCVVVPNSNLKKSSLTAVPKWPARLHIAPERIGDIHGGSISSFKHDDSKWKVRVKHYKKLLPAIGTDKIRNVMDMNTVYGGFAASIIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWCEAFSTYPRTYDLLHLDGLFTAENHRCEMKYVLLEMDRILRPSGYVIIRESSYYVDAIAAIGKEMRWGCRKEQTEYEIENEKILICQKKLWYPSNPSAR 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2722618 2725075 + Bpe003735.1 Bpe11g00361 110506

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00361 604 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 598 IPR004159 GO:0008168
Bpe11g00361 604 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 86 593 IPR004159 GO:0008168
Bpe11g00361 604 Gene3D Vaccinia Virus protein VP39 175 355 IPR029063 -
Bpe11g00361 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 317 IPR029063 -
Bpe11g00361 604 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 1 598 - -
Bpe11g00361 604 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 438 575 IPR029063 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00361 - - - zju:107430997 1087.02
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00361 Bpe-Chr11:2722618 Bpe11g00386 Bpe-Chr11:2929960 0 dispersed
Bpe11g00361 Bpe-Chr11:2722618 Bpe08g00885 Bpe-Chr8:11245362 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g526 . . . . . . . . Cmo06g00799 Cmo16g01195 . . . . Sed07g1687 Cpe14g00948 . Bhi11g00199 Tan01g2024 Cmetu06g2197 . Hepe06g1136 Mch10g1820 . Cla10g00261 Cam10g0267 Cec10g0274 Cco10g0272 Clacu10g0268 Cmu10g1111 Cre10g0519 . . . . Lsi07g01305 . . Cme06g02576 . . Bda07g00131 . . Bpe11g00361 . . . . . Cma06g00779 Cma16g01144 Car06g00693 Car16g01082 Cpe08g00744 . . . . . . . . . . . . . . . . Csa03g00280 Chy06g02042 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003245 2 3 2 3 2 1 3 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 1 6 4 1 50
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g00361 Bpe_Chr11 FPKM 10.447535 8.908195 12.177583 12.203835 11.754243 15.332808 13.29788 14.268836 15.197173 13.990681