Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00379 ATGGAAGCACAAAATTTGGAATCTGGGAATATAATTGAAGTATGTGGAGATTTACCTTCAGCCGAGTCAAGCTTAAATGGAAGAAAGATATGTGGTGACACGCCATGCGGATTTTCAGACGCGAAAAGCAGTTCAAAAGATGCAAAAGAACGATCAGCTTCGATGCGAAAACTTTGCATAGCAGTTGTGCTTTGTGTTGTATTTATGAGCGTAGAGGTTGTTGGAGGTGTTAAAGCGAACAGTCTTGCAATTTTGACTGACGCTGCCCATTTGCTGTCTGATGTGGCCGCTTTTGCAATTTCCCTGTTTTCCATCTGGGCGTCCGGGTGGGAGGCGACTCCTCGACAGACGTATGGTTTCTTCCGAATTGAAATATTGGGTGCTCTTGTTTCGATTCAGATGATATGGCTTCTTGCTGGAATTCTTGTCTATGAGGCCATTGCTAGAATCATTAACGACACCGGTGAAGTAAAGGGCTTTCTGATGTTTGTGGTTTCTGCCTTCGGTCTAGTGGTTAATATAGCCATGGCTCTGCTACTCGGCCACAATCACAGCCATTCGCACGACCACGGTCACAACCATGGGCCCGGGGATCATGATCATAGCCACGAGGATCACGATGAAAGGCATCTACATGGGATAAGTGTCACCACCACCCACCACCACCACCACCACCATGGCAGCTCGAAGAACAACGATAAGCATCAGCACGAGGAAAATCCGACTGAGCCCCTTCTCGATAAACCAAAGACTAGTCAGGACAAACCAAAGCAGCAAAGAAACATCAACGTCCAAGGCGCGTATCTACACGTGCTTGGAGACTCCATTCAAAGTGTCGGAGTCTTGATTGGCGGGGCACTCATATGGTACAAGCCCGAGTGGAAGATAATCGATCTTATATGTACCCTCCTTTTTTCAGCAATAGTTTTGGGCACTACAATCCGAATGCTAAGGAACATTCTCGAGGTTCTTATGGAAAGCACTCCTCGAGAGGTAGATGCTACGAAGCTCGAAAGGGGCCTGTGTGAGATTGACGATGTGGTTGCCATCCACGAGCTGCATATTTGGGCAATCACGGTCGGAAAGGTACTCTTGGCCTGCCATGTTATAATCAAGCCTGATGCAGATGCAGATTTGGTGTTAGACAAAGTCATAGAATACATAAAAAGAGAATACAACATCAGCCATGTGACTATTCAGATAGAGCGCCAGTAG 1215 46.58 MEAQNLESGNIIEVCGDLPSAESSLNGRKICGDTPCGFSDAKSSSKDAKERSASMRKLCIAVVLCVVFMSVEVVGGVKANSLAILTDAAHLLSDVAAFAISLFSIWASGWEATPRQTYGFFRIEILGALVSIQMIWLLAGILVYEAIARIINDTGEVKGFLMFVVSAFGLVVNIAMALLLGHNHSHSHDHGHNHGPGDHDHSHEDHDERHLHGISVTTTHHHHHHHGSSKNNDKHQHEENPTEPLLDKPKTSQDKPKQQRNINVQGAYLHVLGDSIQSVGVLIGGALIWYKPEWKIIDLICTLLFSAIVLGTTIRMLRNILEVLMESTPREVDATKLERGLCEIDDVVAIHELHIWAITVGKVLLACHVIIKPDADADLVLDKVIEYIKREYNISHVTIQIERQ 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2873385 2874599 + Bpe003753.1 Bpe11g00379 110524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00379 404 Gene3D Cation efflux protein transmembrane domain 54 324 IPR027469 -
Bpe11g00379 404 TIGRFAM CDF: cation diffusion facilitator family transporter 55 404 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bpe11g00379 404 MobiDBLite consensus disorder prediction 185 260 - -
Bpe11g00379 404 MobiDBLite consensus disorder prediction 216 230 - -
Bpe11g00379 404 MobiDBLite consensus disorder prediction 231 255 - -
Bpe11g00379 404 SUPERFAMILY Cation efflux protein transmembrane domain-like 52 326 IPR027469 -
Bpe11g00379 404 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 1 403 - -
Bpe11g00379 404 MobiDBLite consensus disorder prediction 185 215 - -
Bpe11g00379 404 Pfam Cation efflux family 59 325 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Bpe11g00379 404 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 333 402 IPR036837 -
Bpe11g00379 404 PANTHER METAL TOLERANCE PROTEIN A1 1 403 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g00911 Bpe11g00379 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01477 Bpe-Chr2:18053017 Bpe11g00379 Bpe-Chr11:2873385 4.62E-32 transposed
Bpe05g01055 Bpe-Chr5:23078042 Bpe11g00379 Bpe-Chr11:2873385 0 transposed
Bpe11g00744 Bpe-Chr11:5655141 Bpe11g00379 Bpe-Chr11:2873385 1.51E-115 transposed
Bpe11g00379 Bpe-Chr11:2873385 Bpe08g00911 Bpe-Chr8:11560085 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00379 K14689 - qsu:112039309 581.252