Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00399 ATGCGTATAGGTTTTGAGGATGACATTCCTCCAGACAAGCTCCTCGCCGGACTTTTGGCTCCGGATTTCGACGATCAATCTTGCTTGAGTCGATACAGAGCGAGCATGTATCGAAAATCCTCTCCTTACAAACCGTCTTCTCATCTCATCTCGAGACTCCGGAAGTACGAAGATCGCCACCGGCTTTGCGGACCGCACTCCAAGTTCTTCAACGAGAGTCTAAAATTGCTTGGAGGCGACAAGAATTTCACGTCTTCGCCGTGCAAGTACGTAATCTTGATGACCCGGGACGGGCTGGGAAATAGAATGCTTGCAATCGCATCGGCGTTTCTCTACACGTTGATCACAGATAGAGTGGTGCTGATTAACCGAGTGGATGTGTTGGACGATCTTTTCTGCGAGCCGTTCGGGGAGAGATCGTGGTTGTTGCCGGAGAATTTTCCAACGAGGGATCAATTCAGGTTCTTTAAGAACTCACTGGGCAACATTTTGAGGGATGATATTCATATCAAACCAAGTGCATTGCCACCATATTTATCTCTCTATCTGTCTCATAATGCTAACAATTATGACAAGCTATTTTACTGCGAAAAACACCAAGCTCTTGTCCAAAACGTCACATGGCTGATAATGGAGACCAACAACTACATAATTCCAGGTCTTTTCCTCATACCCTCTTTTGAAAAACAGTTTTCTAAATTGTTTCCCAGAAAGGATACCGTTTTTCATCAATTGGGTAGATACCTTTTCCACCCTACAAATGATGTATGGGGACTAATCAGTAGATACAACGATGCATACCTGTCAAAAGCGAAGGAGAAACTCGGCATCCAAATCCGGGTTTTCAAATCCGAATCCGGGTCTTTCCAACACCATATGGATCAGATTCTGGCCTGCACTAGATTGGGGAATCTCCTCCCGGAGCTAAACACGACGAGGCGGCAGGCGATTCTCCGGCCGAAGACTCGGAAAACGAAGGCGGTTTTGATAACGTCATTGAGCTCAATGTACCTGGAGAATGCGAAGAAGCTGTACTGGGAATACCCAACTGAAAATGGCGATGTAATTGGGGTTTACCAGCCTAGCCATGAAGATTTTCAGAAAACTGGAGACAGACTTCACAACAAAAAGGCGTTGGCCGAGATTTATCTGCTGAGCCAGAGTGATGTCCTGGTGACGAGCGCTTGGTCTACTTTTGGGTACGTGGCTCAAGGGCTGGCTGGGTTGAAGCCATGGATTCTGTACAAACCGGAGGAGAAGGTTTTCGGAGGGCTCGACGTGGGGTTGAAGTATAAGAATGAGAATGAAACAGAGCATAGTCTGCCGTGTGGGTTGGCGGTGTCGATGGAGCCTTGCTTTCACGCGCCGCCTGTTTGTGAATGTGAGAATTTCGGTAGGCTTGATGACGCCGCTGCTCTTCCTTTCTTGAAACACTGCGAGGATTTGAGCTGGGGCCTTAAGATTGTCGATCGGGATTGA 1479 47.4 MRIGFEDDIPPDKLLAGLLAPDFDDQSCLSRYRASMYRKSSPYKPSSHLISRLRKYEDRHRLCGPHSKFFNESLKLLGGDKNFTSSPCKYVILMTRDGLGNRMLAIASAFLYTLITDRVVLINRVDVLDDLFCEPFGERSWLLPENFPTRDQFRFFKNSLGNILRDDIHIKPSALPPYLSLYLSHNANNYDKLFYCEKHQALVQNVTWLIMETNNYIIPGLFLIPSFEKQFSKLFPRKDTVFHQLGRYLFHPTNDVWGLISRYNDAYLSKAKEKLGIQIRVFKSESGSFQHHMDQILACTRLGNLLPELNTTRRQAILRPKTRKTKAVLITSLSSMYLENAKKLYWEYPTENGDVIGVYQPSHEDFQKTGDRLHNKKALAEIYLLSQSDVLVTSAWSTFGYVAQGLAGLKPWILYKPEEKVFGGLDVGLKYKNENETEHSLPCGLAVSMEPCFHAPPVCECENFGRLDDAAALPFLKHCEDLSWGLKIVDRD 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3049667 3051145 - Bpe003772.1 Bpe11g00399 110544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00399 492 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 422 491 - -
Bpe11g00399 492 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE 8 420 - -
Bpe11g00399 492 Gene3D - 85 140 - -
Bpe11g00399 492 Pfam Xyloglucan fucosyltransferase 10 461 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bpe11g00399 492 PANTHER FUCOSYLTRANSFERASE 2-RELATED 422 491 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bpe11g00399 492 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 420 IPR004938 GO:0008107|GO:0016020|GO:0042546
Bpe11g00399 492 Gene3D - 259 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00399 Bpe-Chr11:3049667 Bpe11g01651 Bpe-Chr11:12665607 4.16E-177 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00399 K13681 - csv:101222105 573.163