Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00402 ATGGAGTCGAGGTACAGAGGGGAAAACTTAGTAGTTGGAGAAGTCAGTGGTAATGGAGTTTTTATTCAAACAACGGAAGTTGAAGCAAAGCTAGATGGGGGCAACATTCAAGAGGCTGAATCTTCATTACGGGAAGGCTTATCGTTGAATTTTGAGGAAGCCAGAGCTCTTCTTGGAAAGTTGGAGTATCAAAGAGGCAATGTGGAAGGGGCTCTTCGTGTTTTTGATGGCATCGATCTCCAAGCAGCAATTCAGAGATTGCAACCTTCATTTCCAGAAAAGATTCTGTCCAAAAAGGGTCGTTGTCGCACAGATTCGCAGCATGCAGTCTCTCAGCATGCTGCTAACCTGGTACTTGAAGCCATATATTTAAAAGCAAAGTCTCTTCAAAAGCTTGGGAAATTAACTGAGGCTGCTCATGAGTGTCAAAATGTGCTCAATGCCGTGGAGAAGATATTCTATCTAGGCATACCAGATGTGCAAGTTGACAATAGATTGCAAGAGACAGTTAGTCAAGCTGTTGAGCTTCTTCCAGAGCTTTGGAAACAGGCGGGTTGCTACCAGGAAGCAATTTCTGCCTATCGACGAGCACTCTTGAGTCAATGGAACCTTGATAATGATACCTCTGCCAGGATTCACAAAGGATTTGCGGTTTTTCTGCTTTATGGAGGAGTAGAAGCTAGCCCTCCTAGTTTAGCAGTTCAGGGTGAAGGCTCATATGTACCCAAAAACAATGTAGAAGAGGCAATGCTACTTATGATGATTCTAATGAAGAATTTTTTCCTTGGTAAGATCAATTGGGATCCATCAGTAATGGATCACTTAACATTTGCACTATCTTTATGCTGCCAAACTTCAATTTTAGCTAAACAATTTGAAGAAATCATGCCTGGAGTATATCACCGTATAGATCGATGGATGTCTTTAGCTCTTTGTTACAGTGGAGCAGGACAAAATAAATCTTCATTAAACCTGTTGAGGAAGTCCTTGCACAAACACGAAAAACCAAATGATATGCTGACATTGTTATTGGCTGCGAAGATCTGCAGTGAAGATTCTTACCTTGCTGCTGAAGGAGTTGGATACGCCCAAAGGGCGATTCGTAATGCAATAGGGAAAGAAGAGCATTTAAAGGGCGTGGGCCTTCGGATGTTGGGTCTTTGTTTGGGAAAGCAAGCGAAGATATCCTCCTCCGATTTTGAGAGGTCGAGTCTTCAGTCGGAGGCATTGAAATCTCTCGATGGGGCAGCTTCTCTGGAGTGCAATAATTCCGAATTGAATAGTGAGTTGGGAGTTCAATATGCAGAACATAGGAATTTGATTGCTGCTTTGCGTTATGCGAAGAAGTATATCGATAAAACTGGTGGTTCTGTCTTAAAAGGCTGGAAATTGCTTGCTCTTGTGTTGTCTTCTCAGAAAAGATTTGCAGAGGCTGAGGTAGTAACCGATGCAGCTTTAGATGAGACTGCAAAATGGGAGCAAGGACCACTTCTCAGGCTTAAAGCCAAGCTGAAAATCTCCCAGTCACTACACATGGATGCTATTGAAACTTATCGTTACCTCCTGGCATTAGTTCAAGCTCAAAGAAAATCATTTGGGCGTCCACTTAAACTTGTTAATCGGATTGAGGATGATAAGGTGCAGGAATTTGAAATATGGCATGGCCTGGCATACCTGTACGCCAGCCTTTCACATTGGAAAGATGCAGAGATATGTGTGATATGCGAAGGACGTGGACAAATTGCAGAAGCTCTGTCTGCTTATATTAATGCCCTCCTACTTGAGCCTTGCTATGTTCCCTGCAATATATTGATCGGTGCCCTGTTGACCAAAACAGGCTCACAGTTGCCTATTGCCAAATCCTTGCTCTCCGATGCATTGAGGATCGACCCGACCAATAGGAAGGCTTGGTATTATTTGGGAGTTGTTCATAAGGAAGATGGGCGAGTAGCCGATGCCATCGATTGCTTTCAGGCCGCATCAATGCTCGAAGAATCCGATCCAATCGAAAGCTACGGCTCCATTCTCTAA 2031 43.43 MESRYRGENLVVGEVSGNGVFIQTTEVEAKLDGGNIQEAESSLREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFPEKILSKKGRCRTDSQHAVSQHAANLVLEAIYLKAKSLQKLGKLTEAAHECQNVLNAVEKIFYLGIPDVQVDNRLQETVSQAVELLPELWKQAGCYQEAISAYRRALLSQWNLDNDTSARIHKGFAVFLLYGGVEASPPSLAVQGEGSYVPKNNVEEAMLLMMILMKNFFLGKINWDPSVMDHLTFALSLCCQTSILAKQFEEIMPGVYHRIDRWMSLALCYSGAGQNKSSLNLLRKSLHKHEKPNDMLTLLLAAKICSEDSYLAAEGVGYAQRAIRNAIGKEEHLKGVGLRMLGLCLGKQAKISSSDFERSSLQSEALKSLDGAASLECNNSELNSELGVQYAEHRNLIAALRYAKKYIDKTGGSVLKGWKLLALVLSSQKRFAEAEVVTDAALDETAKWEQGPLLRLKAKLKISQSLHMDAIETYRYLLALVQAQRKSFGRPLKLVNRIEDDKVQEFEIWHGLAYLYASLSHWKDAEICVICEGRGQIAEALSAYINALLLEPCYVPCNILIGALLTKTGSQLPIAKSLLSDALRIDPTNRKAWYYLGVVHKEDGRVADAIDCFQAASMLEESDPIESYGSIL 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3073455 3077280 - Bpe003776.1 Bpe11g00402 110547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00402 676 Pfam Tetratricopeptide repeat 618 660 - -
Bpe11g00402 676 PANTHER PROTEIN NPG1 1 675 IPR043376 -
Bpe11g00402 676 SUPERFAMILY TPR-like 119 336 IPR011990 GO:0005515
Bpe11g00402 676 SMART tpr_5 119 152 IPR019734 GO:0005515
Bpe11g00402 676 SMART tpr_5 303 336 IPR019734 GO:0005515
Bpe11g00402 676 SMART tpr_5 459 492 IPR019734 GO:0005515
Bpe11g00402 676 SMART tpr_5 634 667 IPR019734 GO:0005515
Bpe11g00402 676 ProSiteProfiles TPR repeat profile. 634 667 IPR019734 GO:0005515
Bpe11g00402 676 SUPERFAMILY TPR-like 520 658 IPR011990 GO:0005515
Bpe11g00402 676 Gene3D Tetratricopeptide repeat domain 288 571 IPR011990 GO:0005515
Bpe11g00402 676 Gene3D Tetratricopeptide repeat domain 26 224 IPR011990 GO:0005515
Bpe11g00402 676 PANTHER CALMODULIN-BINDING PROTEIN 1 675 - -
Bpe11g00402 676 SUPERFAMILY TPR-like 407 572 IPR011990 GO:0005515
Bpe11g00402 676 Gene3D Tetratricopeptide repeat domain 572 670 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00402 Bpe-Chr11:3073455 Bpe13g00544 Bpe-Chr13:12723507 0 dispersed
Bpe11g00402 Bpe-Chr11:3073455 Bpe08g00941 Bpe-Chr8:11834045 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00402 K21843 - csv:101206641 1055.05