Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00405 ATGGCGATGCCAATGGCGGTACTATGGATGCTAATGACTTCTCTGTTGTTGTTAACGCAGGCGACAGCTCAGCCATCGTCATCATCGGTGGCGAAGCCCGGCTGCGAAGATCGATGCGGAGAGGTTGAAATTCCATACCCTTTTGGCATCGGAAGCAATTGCTCTCTGGGCGAGTGGTTTACCATAGATTGCAACCATTCGACTACTCCTCCAAAGCCATTTTTAAGCAAAATTCAGAGCGAAGTGACGAGTATTTCTTATGGTGGGAGGATTAGTATCAATTGGCCTATAGTTTCGAGTTCCAACTGCAGCAATGGCGCAAATAAAACAAAGTCCGCGGACTTGACTGGAAGCTCTTTCGTCTTCTCCGAAGCGGACAACAAATTTATATCTGTGGGATGTAATAATAAAGCTTTAATGACTTCGAATACTACGATTTACGGTGGGTGTCTGTCTCTCTGCAATAATGAGACGCTTGACGATAGAGAATTTTTCACCTGCAATGGAATCGACTGTTGCCAAACCAATATCCCTGCTGATCTCAAGTTGTTTGGCATAAATCTATTGAGATTGCTTCCGGAAAAAGAAGAAAATGGTTGTAAGTACGGATTCGTGGTGGATCAACATTGGTTTTTTAACAATATTAGATTGCTTTCAGACTTGAAAAATCGGGAATTCTTACCAGCAAATCTTGACTGGAGTATATCAAGGCCCATGTTTGATCTGATGGAGGTAACCGGGGGAGAAACTATCTCACGTGAGTGTGGAAGTGCATTTGTTAATTCAACCTCATTCGGTGATCATAGCTCAGTCGTCATTTGTAAGTGCAGGCATGGTTACCAGGGAAATCCTTATCTTCCTAACGGATGTCAAGCTATTGACGAATGCATGGTTTCAAGGCAGTCTCCTTGTCCGCCTCATATGATTTGCAAAAATATTAATGGGAATTATTCGTGTATTGATAAACCTGGGCCATATATGAGTTATAAGCAAACTTATATACTCGATGTAGGGGTTGGATTGGCAGTCGGAGTGTGCATTCTAATTTTTGGGTCATTGTGGTTGAACAAAGTAGTCAAGAGAAGAAAAAAAGCTAAACGAAAAGAAAATTTTTTCAAAAAAAATGGCGGATTATTGCTAAAGCAACAACTGGAAAAAGGGGAGGTTAACGTCGAAAAGACGAAACTCTTCGACTCGAAGGAGCTGGAAAAGGCGACTGACCGGTTCAATGCGAATCGTGTTTTGGGTCAAGGAGGACAGGGAACTGTCTACAAGGGAATGCTTACAGATGGAAAGATAGTGGCGGTAAAGAAGTCGAAGGTGGTCGGCGAAAGCAAGATCGAAGAGTTCATCAATGAAGTCGTGATTTTGTCTCAAATTAACCACAGAAATATAGTGAAATTGATGGGGTGTTGTTTGGAAACAGAAGTTCCTTTACTTGTCTATGAATTTGTTCCAAATGGATCACTTTTCAACTTTCTCCATGAATCCAGTGAAGAGCTTCCTCTGACATGGGAGATGAGGATGAGGATTGCCAATGAAATTGCAGGTGCCCTTTTCTACCTCCACTCGGCAGCTTCGCAGCCCATTTTTCACAGGGACATAAAGTCTTCAAACATTCTCTTGGATGAAAAATACAGGGCCAAAATTGCGGACTTTGGGACTTCAAGGTCGGTAGCTATCGACCAAACTCACCTCACCACACGAGTTCAAGGCACTTTTGGGTACTTAGATCCTGAGTTTTTCCAATCGAGCCAGTTCACCGAAAAGAGCGATGTTTATAGTTTTGGGGTAGTCCTTGTCGAGCTTTTAACCGGGCAGGCTCCAATTTCTCATAATAGGTTAGTGGAAGGACAAAGTTTGGCTTTTTATTTCATTGATTCTATGGAGGGAAACATTCTATTTGATATTCTAGATGGGAGAGTCATCAATGAAAGTAGACGAGAAGATATCATTGTAGTCGCTAATCTTGCCAAGAGATGCTTGAACTTGAATGGACGATTCCGGCCGACGATGAAGGAGGTCGTGATGGAGCTAGGATCCGTCCAAAGGACCCGAAAAGACGAGAATATTTGCTCGGTGGATGAGGTTGCGAGAAGGGAAGAAACCATGTATTGGGAAGACACTTCAATGTCAACAAGGTCTTATTTGGATAGTGATACTTTTAGATTGTTAGACCAATGA 2184 42.54 MAMPMAVLWMLMTSLLLLTQATAQPSSSSVAKPGCEDRCGEVEIPYPFGIGSNCSLGEWFTIDCNHSTTPPKPFLSKIQSEVTSISYGGRISINWPIVSSSNCSNGANKTKSADLTGSSFVFSEADNKFISVGCNNKALMTSNTTIYGGCLSLCNNETLDDREFFTCNGIDCCQTNIPADLKLFGINLLRLLPEKEENGCKYGFVVDQHWFFNNIRLLSDLKNREFLPANLDWSISRPMFDLMEVTGGETISRECGSAFVNSTSFGDHSSVVICKCRHGYQGNPYLPNGCQAIDECMVSRQSPCPPHMICKNINGNYSCIDKPGPYMSYKQTYILDVGVGLAVGVCILIFGSLWLNKVVKRRKKAKRKENFFKKNGGLLLKQQLEKGEVNVEKTKLFDSKELEKATDRFNANRVLGQGGQGTVYKGMLTDGKIVAVKKSKVVGESKIEEFINEVVILSQINHRNIVKLMGCCLETEVPLLVYEFVPNGSLFNFLHESSEELPLTWEMRMRIANEIAGALFYLHSAASQPIFHRDIKSSNILLDEKYRAKIADFGTSRSVAIDQTHLTTRVQGTFGYLDPEFFQSSQFTEKSDVYSFGVVLVELLTGQAPISHNRLVEGQSLAFYFIDSMEGNILFDILDGRVINESRREDIIVVANLAKRCLNLNGRFRPTMKEVVMELGSVQRTRKDENICSVDEVARREETMYWEDTSMSTRSYLDSDTFRLLDQ 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3093826 3096348 - Bpe003779.1 Bpe11g00405 110550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00405 727 Pfam Protein kinase domain 410 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00405 727 SMART serkin_6 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00405 727 CDD STKc_IRAK 415 679 - -
Bpe11g00405 727 PANTHER - 19 699 - -
Bpe11g00405 727 ProSiteProfiles Protein kinase domain profile. 409 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00405 727 SUPERFAMILY Protein kinase-like (PK-like) 395 709 IPR011009 -
Bpe11g00405 727 Gene3D Phosphorylase Kinase; domain 1 380 484 - -
Bpe11g00405 727 Pfam Wall-associated kinase 166 236 IPR013695 GO:0004674|GO:0016021
Bpe11g00405 727 Gene3D Transferase(Phosphotransferase) domain 1 485 705 - -
Bpe11g00405 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Bpe11g00405 727 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 19 699 IPR045274 GO:0007166
Bpe11g00405 727 Gene3D Laminin 252 333 - -
Bpe11g00405 727 Pfam Wall-associated receptor kinase galacturonan-binding 35 91 IPR025287 GO:0030247
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00945 Bpe-Chr8:11870614 Bpe11g00405 Bpe-Chr11:3093826 0 dispersed
Bpe11g00405 Bpe-Chr11:3093826 Bpe06g00236 Bpe-Chr6:12559983 5.26E-67 dispersed
Bpe02g00285 Bpe-Chr2:1894787 Bpe11g00405 Bpe-Chr11:3093826 4.67E-179 transposed
Bpe14g00017 Bpe-Chr14:346810 Bpe11g00405 Bpe-Chr11:3093826 1.38E-47 transposed
Bpe14g00403 Bpe-Chr14:3774662 Bpe11g00405 Bpe-Chr11:3093826 1.30E-149 transposed
Bpe02g00738 Bpe-Chr2:5126981 Bpe11g00405 Bpe-Chr11:3093826 1.54E-80 transposed
Bpe11g00405 Bpe-Chr11:3093826 Bpe08g00944 Bpe-Chr8:11859582 1.03E-44 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63562 PF00069 Pkinase 1.80E-51 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00405 - - tcc:18603429 691.419