Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00416 ATGAACAGATTAGCTGGAGATCTTCTGCCATTCTTTTTTCTGTTGGTCTCTCTACTTCCGGCGATAGCTGCGGGGGAGTGTACCTGCGATAGCGGAGAAGAAAAAGGTCGAGACAAAAAGCAAGCTCTTAAATACAAACTCGCAGCCATAGCCGCTATTCTCGTCGCCGGTGCAATCGGAGTTACTATTCCGACTCTAGGTAAGACTATTTCAGGTTTACGGCCGGAGAAGAACATATTTTTCATCATAAAAGCTTTTGCCGCCGGCGTTATACTATCAACCGGGTTTATTCACATTCTTCCCGAAGCTTTTGAAAGCCTTACTTCGTCATGCTTGAGCGAAGAGCCATGGGGTAAGTTTCCCTTTGCTGGTTTCGTGGCTATGGCGGCGGCGATTGGGACTCTAATGGTGGACGCTTGTGCTACTTCGTATTTCGGAAAATCCCGGCTCAGAAAAGCTTCGCCGGAAAATGAGGACGAAGAGCGGAGTAATGAGGCAAATACTTTTCATACTCATGCCACTCACGGCCATTCTCATGGCCCTATTGATCATTCCGGGGAGACGGATCTTCTCCGACACCGTGTTATTTCACAGGTTTTGGAGCTGGGAATCATAGTTCATTCAGTAATAATAGGATTATCAGTGGGTGCCTCAGAAAGTCCCCGGACGATTAAGCCTCTGGTTGCCGCTCTCACCTTTCATCAATTCTTTGAAGGCATGGGCCTCGGAGGATGCATTGCTCAGGCACAGTTCAAGAACAAAGCAGCAGCTGTGATGGGGTTGTTCTTTGCTCTGACGACGCCAATAGGAATAGTAATAGGAATAGGAATATCAAAGATATATGACGAGAATAGCCCCACTGCGCTGATAGTAGAAGGGATATTCAATTCAGCCTCAGCTGGAATCCTGGTTTACATGGCTCTTGTTGATCTTCTTGCTGCTGACTTCATGAATCCAAAAATGCAATCTAATGCAAAGCTTCAATTTTGGGCTTATTTTTCCCTTCTTTTGGGTGCTGGTTGTATGTCTCTTTTAGCTAAATGGGCTTAA 1050 46.0 MNRLAGDLLPFFFLLVSLLPAIAAGECTCDSGEEKGRDKKQALKYKLAAIAAILVAGAIGVTIPTLGKTISGLRPEKNIFFIIKAFAAGVILSTGFIHILPEAFESLTSSCLSEEPWGKFPFAGFVAMAAAIGTLMVDACATSYFGKSRLRKASPENEDEERSNEANTFHTHATHGHSHGPIDHSGETDLLRHRVISQVLELGIIVHSVIIGLSVGASESPRTIKPLVAALTFHQFFEGMGLGGCIAQAQFKNKAAAVMGLFFALTTPIGIVIGIGISKIYDENSPTALIVEGIFNSASAGILVYMALVDLLAADFMNPKMQSNAKLQFWAYFSLLLGAGCMSLLAKWA 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3167423 3169135 + Bpe003788.1 Bpe11g00416 110561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00416 349 PANTHER ZINC/IRON TRANSPORTER 16 349 - -
Bpe11g00416 349 PANTHER ZINC TRANSPORTER 1 16 349 - -
Bpe11g00416 349 TIGRFAM zip: ZIP zinc/iron transport family 30 349 IPR004698 GO:0005385|GO:0016021|GO:0071577
Bpe11g00416 349 Pfam ZIP Zinc transporter 44 346 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00964 Bpe-Chr8:12031438 Bpe11g00416 Bpe-Chr11:3167423 0 dispersed
Bpe11g00416 Bpe-Chr11:3167423 Bpe12g00033 Bpe-Chr12:286186 7.74E-140 dispersed
Bpe02g02300 Bpe-Chr2:23710363 Bpe11g00416 Bpe-Chr11:3167423 3.06E-94 transposed
Bpe11g00416 Bpe-Chr11:3167423 Bpe08g00961 Bpe-Chr8:12013741 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00416 K14709 - rcu:8279565 459.914