Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00444 ATGCCTGGAAACAAGTACAACGGTAATTTAAATAACATTAAAGACCGTATTCCAGGTCGAGTGGAAAGGCTACTGAGGGAAAGAGAGCTAAGAAAAAGCAGCAGAGCTTCACATTCTAACGAATTAAATGATAACAATAGAGAAGCTGACTTAATTGAGCGTAACCTGCGCCTGAGAGAAGAAGATAACTCTGGCATTTCATGCGTTGAAAAATTCTTGGAATCATCAGCACCTAATTGGGCTTTTACTGAGGGATGTGAACGGCAAGATGGGAAAGCTCTTAGACAAAGACTGCTGGTTGTAGCTAACAGGCTGCCGGTTTCTGCTGTTAGAAGAGGAGAAGACTCCTGGTCTCTGGAGATAAGCGCTGGGGGTCTAGTCAGTGCACTTCTAGGTGTGAAGGAGTTTGAAGCAAGATGGATTGGTTGGGCAGGAGTAAACGTGCCAGATGCGATTGGGCAAAAGGCACTCACTAAAGCTTTAGCTGAGAAGAGTTGTATCCCAGTTTTCCTGGATGAAGAAATTGTTCATCAATATTACAATGGCTACTGCAACAATATTTTATGGCCTCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTTGCCACCACTCGTAGTTTTCAGTCTCAGTTTGCAGCATATAAGAAGGCAAATCAAATGTTTGCTGATGTCGTTAACATGCACTATGAAGAGGGTGACGTTGTTTGGTGTCATGATTACCATCTTATGTTTCTTCCAAAATGTCTCAAGGAACATAACAGCAAGATGAAAGTCGGATGGTTTCTTCACACTCCATTTCCTTCTTCTGAAATTCATAGGACGCTGCCATCTCGATCTGAGCTGCTGCTTTCTGTACTAGCAGCTGATTTAGTAGGTTTTCATACTTATGACTATGCACGCCATTTTGTAAGTGCTTGTACACGTATTCTTGGTCTTGAGGGTACACCAGAAGGCGTTGAGGATCAAGGGAAGCTGACACGAGTTGCTGCATTTCCCATTGGAATAGACTCAGATCGTTTTACTCGTGCGCTTGAGGTTCCCCAAGTCCAAGAACATATCAAAGAATTGAAAGAAAGATTTAAAGGTCGAAAGGTAATGTTAGGTGTCGATCGCCTTGATATGATTAAAGGAATTCCTCAAAAGATACTAGCATTTGAAAAATTTTTGGAAGAAAATCCTACTTGGCGTGATAAAGTAGTTCTTTTGCAAATTGCCGTACCTACAAGAACAGATGTCCCTGAGTATCAAAAATTAACGAGTCAGGTTCATGAAATTGTTGGACGCATAAATGGACGATTCGGCACCTTGGCAACTGTTCCCATTCATCATCTGGATCGTTCACTTGATTTTCATGCCTTATGTGCTCTATATGCCGTTACTGATGTAGCATTAGTCACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAGTTTGTAGCTTGCCAAGATGCAAAGAAAGGTGTCCTCATTCTCAGTGAGTTTGCTGGCGCAGCCCAGTCCTTAGGGGCTGGTGCACTTTTAGTGAACCCTTGGAACATAACTGAAGTTGCAAAATCAATTGACCGTGCTTTAAATATGACTGCTGAAGAGAGAGAGAAACGTCACAGGCATAATTTTGCTCATGTGACAACACACACTGCTCAGGAGTGGGCTGAAACTTTTGTGAGTGAATTGAACGACACTGTTGTTGAAGCTGAACTAAGGATAAGACAAGCTCCGCCCTGTCTTCCCTTTGAGGATGCAATAAAACATTATTTGAGGTCAAATAATCGATTACTCATATTGGGATTTAATTCGACATTAACTGAACCAGTGGACACACCAGAGAGAAGAGGTGATCAAATAAGAGAAATGGAATTGAAATTGCACCCAGACTTAAAAGAGTCGTTGACCAATCTCTGTCGCAATACAAAGACAACAATTGTTATCCTTAGTGGGAGTGACAGAACAATCTTAGATGATAACTTTGGAAACTATGACATGTGGTTGGCGGCTGAAAATGGAATGTTTTTACGATTTACCAAGGGAGATTGGATGACTACAATGCCAGAGCATTTGAATATGGAATGGGTCGACAGTGTGAAGCATGTTTTTGAGTATTTCACAGAAAGAACACCCCGTTCACATTTTGAACCGCGAGAAACTTCACTTGTGTGGAATTATAAATATGCAGATGTTGAATTTGGGAGACTTCAAGCAAGGGATATGTTGCAGCACCTCTGTACAGGGCCCATTTCCAATGCATCTGTCGATGTTGTCCAAGGTAGTCGATCTGTTGAGGTACGAGCAGTTGGCGTTACAAAGGGTGCAGCTATTGACCGTATATTAGGAGAGATTGTTCACAGTAAATCCATGACAACTCCAATTGATTATGTCCTATGTATTGGACATTTTCTTGGGAAGGATGAGGATGTATACACTTTCTTTGAGCCTGAGCTTCCTTCTGATACCATAGGTCTAGGAAGATCCAAGGCAATGGATGGACTTAAGCTATCCAATGAGAGAAGATCAGCTTTGAAGCTCCCACCTAACAGAAATGCCTCAAAATCATCTCACACCAGTAAAGCAAGGCATATACTGCATTCCGAGAGGAAAACTCCGGCCAACCACCTGTCTGGAAGTGGAAAAAAACAATCGCCGGAGAAGATTCAGTGGAATGTGCTTGATCTTAAAGCTGAGAACTACTTCTCATGTGCTGTTGGGCGGACCCGCACAAGTGCTAGATATCTACTCGGATCGTCTGATGATGTTGTATCTTTTCTTAAGGAGCTCTCTAATGCAACATTATCTGACTCTTAA 2808 41.95 MPGNKYNGNLNNIKDRIPGRVERLLRERELRKSSRASHSNELNDNNREADLIERNLRLREEDNSGISCVEKFLESSAPNWAFTEGCERQDGKALRQRLLVVANRLPVSAVRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDAIGQKALTKALAEKSCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNMHYEEGDVVWCHDYHLMFLPKCLKEHNSKMKVGWFLHTPFPSSEIHRTLPSRSELLLSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGKLTRVAAFPIGIDSDRFTRALEVPQVQEHIKELKERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPTWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLATVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDAKKGVLILSEFAGAAQSLGAGALLVNPWNITEVAKSIDRALNMTAEEREKRHRHNFAHVTTHTAQEWAETFVSELNDTVVEAELRIRQAPPCLPFEDAIKHYLRSNNRLLILGFNSTLTEPVDTPERRGDQIREMELKLHPDLKESLTNLCRNTKTTIVILSGSDRTILDDNFGNYDMWLAAENGMFLRFTKGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFEPRETSLVWNYKYADVEFGRLQARDMLQHLCTGPISNASVDVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDVYTFFEPELPSDTIGLGRSKAMDGLKLSNERRSALKLPPNRNASKSSHTSKARHILHSERKTPANHLSGSGKKQSPEKIQWNVLDLKAENYFSCAVGRTRTSARYLLGSSDDVVSFLKELSNATLSDS 935
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3381189 3396028 + Bpe003815.1 Bpe11g00444 110589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00444 935 Pfam Glycosyltransferase family 20 97 562 IPR001830 GO:0003824|GO:0005992
Bpe11g00444 935 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 928 - -
Bpe11g00444 935 MobiDBLite consensus disorder prediction 838 882 - -
Bpe11g00444 935 Gene3D - 687 767 - -
Bpe11g00444 935 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 928 IPR001830 GO:0003824|GO:0005992
Bpe11g00444 935 CDD HAD_TPP 595 828 - -
Bpe11g00444 935 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 97 562 IPR012766 GO:0003825|GO:0005992
Bpe11g00444 935 Gene3D - 621 781 IPR023214 -
Bpe11g00444 935 Coils Coil 929 935 - -
Bpe11g00444 935 Gene3D Glycogen Phosphorylase B; 344 546 - -
Bpe11g00444 935 Pfam Trehalose-phosphatase 620 822 IPR003337 GO:0003824|GO:0005992
Bpe11g00444 935 Gene3D Glycogen Phosphorylase B; 89 343 - -
Bpe11g00444 935 Coils Coil 35 55 - -
Bpe11g00444 935 CDD GT20_TPS 97 562 IPR001830 GO:0003824|GO:0005992
Bpe11g00444 935 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 96 565 - -
Bpe11g00444 935 SUPERFAMILY HAD-like 594 927 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01053 Bpe-Chr2:12087895 Bpe11g00444 Bpe-Chr11:3381189 7.63E-106 dispersed
Bpe11g00444 Bpe-Chr11:3381189 Bpe11g01763 Bpe-Chr11:14021187 1.71E-133 dispersed
Bpe11g00444 Bpe-Chr11:3381189 Bpe08g00994 Bpe-Chr8:12279186 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00444 K16055 - csv:101204478 1627.84