Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00454 ATGGCGCAATTGCCTCCTAAAATACCCACCATGACTCAGAATTGGTCTCCCCTTCCTCTTCACAAGCTTCCATTGATGGCGCCCAATCACCCTTCTTGGGTCGACGACTTTCTCGACTTCTCCTCCGCCCGCCGTGTTGCTCACCGGCGCTCCGTCAGCGACTCCATTGCCTTCCTCGAGCTTCCTCTTGTCGACGACTCCCGGAAATCTCCCGCTGCTATTAATGTCGATAATGCGTTTGAGAGGTTGGACGATGAGCAGCTCATGTCCATGTTCTCCGACGACGTTTCTCAGCCGACGACAGCGGCTGTTTCGTCTTCCAATACCTCGACTCCGTCTGATCAGAACAGCGACGACGGTGAACAGAAGCCCGGGGCAGTGAAACAGGAATTGAAAAACGAGTCGGGAGAGGTGGTCAGCTCTAGCCAATCGGATTCACAAGGATTGCCTCCGGAAAATGCCACCCCTCCCGGCGAAAATACCATTGACCCGAAGAGGGTTAAAAGAATTTTAGCTAATAGACAATCAGCTCAGAGATCAAGAGTAAGGAAATTACAATACATTTCAGAGCTAGAACGCAGTGTCACCACATTGCAGAGCGAGGTTTCGGCATTATCTCCAAGAGTAGCATATTTGGACCACCAAAGATTAATTCTAAATGTTGATAATAGTGCTCTCAAGCAAAGAATTGCTGCCTTGGCTCAAGATAAGCTCTTCAAAGATGCTCATCAAGAGGCGTTGAAGAAAGAAATAGAGAGATTAAGGCAAGTCTACCACCAACAAAACATTAAGAAAATGAGCACCAATCAAAATGCTCCACCTCAGCCACAGCCAAACCTAGAGGACAGAACCGACAGTTGA 861 48.55 MAQLPPKIPTMTQNWSPLPLHKLPLMAPNHPSWVDDFLDFSSARRVAHRRSVSDSIAFLELPLVDDSRKSPAAINVDNAFERLDDEQLMSMFSDDVSQPTTAAVSSSNTSTPSDQNSDDGEQKPGAVKQELKNESGEVVSSSQSDSQGLPPENATPPGENTIDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQSEVSALSPRVAYLDHQRLILNVDNSALKQRIAALAQDKLFKDAHQEALKKEIERLRQVYHQQNIKKMSTNQNAPPQPQPNLEDRTDS 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3531443 3533317 + Bpe003826.1 Bpe11g00454 110599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00454 286 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 168 183 IPR004827 GO:0003700|GO:0006355
Bpe11g00454 286 Gene3D - 164 263 - -
Bpe11g00454 286 CDD bZIP_plant_RF2 166 216 IPR044759 GO:0003700|GO:0006355
Bpe11g00454 286 MobiDBLite consensus disorder prediction 134 154 - -
Bpe11g00454 286 SMART brlzneu 161 225 IPR004827 GO:0003700|GO:0006355
Bpe11g00454 286 PANTHER BASIC LEUCINE ZIPPER 34 1 279 - -
Bpe11g00454 286 MobiDBLite consensus disorder prediction 96 120 - -
Bpe11g00454 286 Coils Coil 244 264 - -
Bpe11g00454 286 Pfam bZIP transcription factor 165 212 IPR004827 GO:0003700|GO:0006355
Bpe11g00454 286 SUPERFAMILY Leucine zipper domain 165 219 IPR046347 GO:0003700|GO:0006355
Bpe11g00454 286 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 163 215 IPR004827 GO:0003700|GO:0006355
Bpe11g00454 286 MobiDBLite consensus disorder prediction 96 165 - -
Bpe11g00454 286 PANTHER BASIC LEUCINE ZIPPER 2 1 279 - -
Bpe11g00454 286 MobiDBLite consensus disorder prediction 260 286 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00753 Bpe-Chr10:13829241 Bpe11g00454 Bpe-Chr11:3531443 1.16E-26 dispersed
Bpe11g00454 Bpe-Chr11:3531443 Bpe15g00728 Bpe-Chr15:17799736 1.49E-105 dispersed
Bpe11g00454 Bpe-Chr11:3531443 Bpe12g00198 Bpe-Chr12:1566751 2.18E-116 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22034 PF00170 bZIP_1 1.60E-09 CL0018 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00454 - - qsu:111989326 345.51