Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe11g00460 | ATGGAAGATTATGTCGTTGCAGAGTTTAAGCAAGTTGGTGAAAAAGAACTCGGTTTATTCGCAATTTTCGACGGCCATTTAAGTCACAACATTCCTAACTATTTACAGATGCATTTATTCGAGAATATCTTAAATGAGCCTGATTTTTGGACCAAACCAGCCAACGCAGTTAGGAAAGCGTATAGTGAAACAGATGCAATCATTCTGGACGAGGCAGTGGACTTAGGCAAAGGAGGATCTACTGCTGTTACGGCTATTCTGATCAATTGTCGGAAGCTGGTTGTAGCCAATATTGGAGATTCTCGTGCAATTATCTGTACAAATGGGGTGGCCACTCAATTATCAGTCGATCATGAGCCAAGTGTGGAAAAACATATGATCGAGAGTAGAGGTGGTTTCGTGTCGAACTTTCCAGGAGACGTAGCTCGAGTCGATGGGCAGCTTGCAGTGGCCAGAGCGTTTGGTGATAAAAGCTTGAAGAAACATCTGAGTTCCGACCCTGATGTGGTAGAGGTAATGGTCGAGGATGGGACCGAGTTCATTATATTGGCAAGTGACGGATTATGGAAGGTGATGTCGAACCAGGAGGCAGCAGACTCGATCAAGCATATCAAGGATGCTCGAGCTGCAGCCAAGCAACTGACGGATGAGGCTCTGAAAAGGAAGAGCACGGATGATATTTCATGTATAGTTGTGAGATTTCAGTGA | 708 | 44.63 | MEDYVVAEFKQVGEKELGLFAIFDGHLSHNIPNYLQMHLFENILNEPDFWTKPANAVRKAYSETDAIILDEAVDLGKGGSTAVTAILINCRKLVVANIGDSRAIICTNGVATQLSVDHEPSVEKHMIESRGGFVSNFPGDVARVDGQLAVARAFGDKSLKKHLSSDPDVVEVMVEDGTEFIILASDGLWKVMSNQEAADSIKHIKDARAAAKQLTDEALKRKSTDDISCIVVRFQ | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 3574637 | 3575923 | - | Bpe003832.1 | Bpe11g00460 | 110605 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe11g00460 | 235 | CDD | PP2Cc | 1 | 234 | IPR001932 | - | |
| Bpe11g00460 | 235 | PANTHER | PROTEIN PHOSPHATASE 2C 58-RELATED | 1 | 234 | - | - | |
| Bpe11g00460 | 235 | Pfam | Protein phosphatase 2C | 12 | 227 | IPR001932 | - | |
| Bpe11g00460 | 235 | SMART | PP2C_4 | 1 | 232 | IPR001932 | - | |
| Bpe11g00460 | 235 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 234 | IPR001932 | - | |
| Bpe11g00460 | 235 | Gene3D | - | 1 | 235 | IPR036457 | - | |
| Bpe11g00460 | 235 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 234 | - | - | |
| Bpe11g00460 | 235 | SUPERFAMILY | PP2C-like | 1 | 234 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe01g00740 | Bpe-Chr1:6460606 | Bpe11g00460 | Bpe-Chr11:3574637 | 6.14E-104 | dispersed | |
| Bpe03g00375 | Bpe-Chr3:10503755 | Bpe11g00460 | Bpe-Chr11:3574637 | 2.50E-10 | transposed | |
| Bpe15g00676 | Bpe-Chr15:17425668 | Bpe11g00460 | Bpe-Chr11:3574637 | 4.12E-118 | transposed | |
| Bpe11g00460 | Bpe-Chr11:3574637 | Bpe08g01007 | Bpe-Chr8:12392406 | 2.38E-144 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe11g00460 | K17506 | - | zju:107422455 | 381.719 |