Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00460 ATGGAAGATTATGTCGTTGCAGAGTTTAAGCAAGTTGGTGAAAAAGAACTCGGTTTATTCGCAATTTTCGACGGCCATTTAAGTCACAACATTCCTAACTATTTACAGATGCATTTATTCGAGAATATCTTAAATGAGCCTGATTTTTGGACCAAACCAGCCAACGCAGTTAGGAAAGCGTATAGTGAAACAGATGCAATCATTCTGGACGAGGCAGTGGACTTAGGCAAAGGAGGATCTACTGCTGTTACGGCTATTCTGATCAATTGTCGGAAGCTGGTTGTAGCCAATATTGGAGATTCTCGTGCAATTATCTGTACAAATGGGGTGGCCACTCAATTATCAGTCGATCATGAGCCAAGTGTGGAAAAACATATGATCGAGAGTAGAGGTGGTTTCGTGTCGAACTTTCCAGGAGACGTAGCTCGAGTCGATGGGCAGCTTGCAGTGGCCAGAGCGTTTGGTGATAAAAGCTTGAAGAAACATCTGAGTTCCGACCCTGATGTGGTAGAGGTAATGGTCGAGGATGGGACCGAGTTCATTATATTGGCAAGTGACGGATTATGGAAGGTGATGTCGAACCAGGAGGCAGCAGACTCGATCAAGCATATCAAGGATGCTCGAGCTGCAGCCAAGCAACTGACGGATGAGGCTCTGAAAAGGAAGAGCACGGATGATATTTCATGTATAGTTGTGAGATTTCAGTGA 708 44.63 MEDYVVAEFKQVGEKELGLFAIFDGHLSHNIPNYLQMHLFENILNEPDFWTKPANAVRKAYSETDAIILDEAVDLGKGGSTAVTAILINCRKLVVANIGDSRAIICTNGVATQLSVDHEPSVEKHMIESRGGFVSNFPGDVARVDGQLAVARAFGDKSLKKHLSSDPDVVEVMVEDGTEFIILASDGLWKVMSNQEAADSIKHIKDARAAAKQLTDEALKRKSTDDISCIVVRFQ 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 3574637 3575923 - Bpe003832.1 Bpe11g00460 110605
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00460 235 CDD PP2Cc 1 234 IPR001932 -
Bpe11g00460 235 PANTHER PROTEIN PHOSPHATASE 2C 58-RELATED 1 234 - -
Bpe11g00460 235 Pfam Protein phosphatase 2C 12 227 IPR001932 -
Bpe11g00460 235 SMART PP2C_4 1 232 IPR001932 -
Bpe11g00460 235 ProSiteProfiles PPM-type phosphatase domain profile. 1 234 IPR001932 -
Bpe11g00460 235 Gene3D - 1 235 IPR036457 -
Bpe11g00460 235 PANTHER ALPHABET, ISOFORM E-RELATED 1 234 - -
Bpe11g00460 235 SUPERFAMILY PP2C-like 1 234 IPR036457 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00740 Bpe-Chr1:6460606 Bpe11g00460 Bpe-Chr11:3574637 6.14E-104 dispersed
Bpe03g00375 Bpe-Chr3:10503755 Bpe11g00460 Bpe-Chr11:3574637 2.50E-10 transposed
Bpe15g00676 Bpe-Chr15:17425668 Bpe11g00460 Bpe-Chr11:3574637 4.12E-118 transposed
Bpe11g00460 Bpe-Chr11:3574637 Bpe08g01007 Bpe-Chr8:12392406 2.38E-144 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00460 K17506 - zju:107422455 381.719