Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00503 ATGATGTTAGCCTCGTCACCTTCTACAATTGCACGGAGCTCGCTGGAGGTAATGCTGGATTCTCTCAGGCGGAGAGACGAGAATGACAAGGATAAGGACTTACCTCCGGCACTGCCAGTTCGGCCAACCTCAAAGGGTCGTCTTCCTCCAGCTAGGAGGTCCCTTCCCATCGATTTCAAGGTGGGCGATGAGGGTATTCCACAGTGCTCCGTCAGTGAACTTCATGGGAAGGAAGAAACAAAGAGGAAAGAGAAAGATTTTGAAAGCAGGAAAGGTAGCTTTGGAAGTAAGAGGATGAAGAAAGATCAAAATGAAGAATCGCCTTATGCTATAGCTCTAGAAAACTGCAGAAGTGATTATATGGGGGAATCTAATGGCGCTGCTGCTTCACCGGAAAATGTTGGAGATTCAGAGTGGGATGACAACGTTGGCTATTTCATTAAGAAGAAACTCCTTGTTTGGTGTCCCCTCCCAAATGGAAAGTGGGAACCAGGAACTATACAATCAAGTACAGAGGAAGAAGCGGTTGTTCTTCTCTCAAAGGGGGAAGTTATGAAAGTCTCTACCGTGCAGCTCTTACCTGCTAACCCAGCTATCTTGGAAGGAGTTGACGATCTCATACAAATTAGTTATTTAAACGAGCCATCGGTTGTTCACAACCTCCGGCAGAGATTTTCTCAAGATAAGATCTATAGTAAGGCAGGGCCAGTATTGATTGCAATCAATCCCTTCAAAGATGTCGGTTGTAATGGAAATGATGTTGTTATGGCATATCAACAGAAGCTTGTTGACAGTCCTCATATTTATGCTACAACAGACACAGCCTATAACCAGATGATGTCAGATGGGATCAATCAATCCATTATCATAAGTGGAGAAAGTGGAGCTGGGAAAACTGAGACGGCTAAAGTTGCCATGCAATACTTGGCTTCTCTAGGTGGTGGAAGTTTAGGGCTGGACAAAGGAATACTGCAAACAAATTATATACTGGAAGCATTTGGAAATGCTAAAACATCGAGAAATAATAACTCCAGTCGATTTGGCAAGTTGATTGAAATTCATTTTAGTACACTTGGGAAGATTTGTGGGGCAAAAATCCAAACTTTTTTGTTGGAAAAGCAGTCAAGGGTGGCTCAGCTGGCCCAAGGTGAGAGGTCGTACCATGTCTTTTATCAACTTTGTGCTGGAGCCCCATCACTTCTTAAAGGGAGACTGAACCTCAAGGATGCCTGGGAGTACAAGTATCTCAATCAAAGTGAGTGCATAGTGATTGATGGTGTTGATGATGCTCGAAAATTTAATATTCTCGAGGAAGCTCTAGACACCATTCAAATCTGCAAAGAGGATCAAGAAAATGCATTTTCTATGGTTGTTGCAATTTTATGGCTAGGCAACATCTCATTTAAAGCAATTGATTCTGAAAATCGAGTGGAGGTGGTGGCTGATGAAGCTCTATTGAGTGCAGCAAAGCTAATGGGTTGCAGTTCCCAGGAGCTTATGTTAGTTTTATCGACCCAAAACATTAAAGCTGGAAAGGATACCATTGCCAAAAAGTTTACTTTGCGTCAGGCGATGGACACAAGAGATGCATTAGCGAAGTTTATCTATTCAAACTTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGCAGTGGGAAAACGTTGTATTGAAAGATCTATAAGCATTCTTGACATTTATGGGTTTGAGTCATTTAAGAAAAATAGCTTTGAACAATTTTGCATAAATTATGCCAATGAGAGGCTGCAACAACATTTTAATCGGCATCTATTTAAACTTGAGCAAGAGGACTATGAAGTGGATGGAATTGATTGGACTGAAGTTAATTTTGAAGACAACCAAGAGTGTTTAAATCTCATCGAAAAGAAACCTCTAGGTATTCTAGCTTTGTTGGATGAGGAATCAAAGTTCCCTAATGCTACCGATCTTACATTTGCCAACAAACTTAAGCATCATTTGAATGGGAATTCTTGCTTTAAAGGCGAAAGAGGCAGGGCCTTTGGTGTTCATCACTACGCTGGGGCGGTTGTATATGATACAAATGGATTTCTGGAGAAGAATAGAGATCCATTGCCCTCTGAATCTATTCAGTTCCTTTCGTCATGTAGCTCCAAATTACTACAGTTGTTTGCCTCAAAAGTACTTACCCAGAAAGCAGCAGTTTCTCAATACCATATGGGTACTTTAGAATCTCACAAGCTGAGTGTTGGGGCAAAGTTCAAGATTGGGGCTTTGGAAGAAAAAAGGAAACAGATTCTGAATGGGATTGTTGGGTTGCAAAAATTCTTTCGAGGAAACCTTGCACGCCGTCATTTCTACGACCTTAGGAATGAAGCCATGACACTACAATCATTCATTCGAGGCGAAAATGCCAGAAGAGAATATATTGTCAGAGTTACAACAAATAACAAGCTTCAAGCAATTATACAATTACAATCTGTGATTCGTGGTTGGCTTGTCCGAAGGCGTCACTGTGAGATGCTAGTTTTGAAGAAGCAATCTTATGATGATGTGAAGACTAAACCAAAGCATAGTTGGAGGATTTCCGAAGTTATGCCAGAGGAAAAGATTGAAATTTTACCAACGGGGTTGGCAGAGCTTCAAATGCGGGTCCTGAAGGCAGAATCGACATTGGAGAAAAAGGAAGAGGAAAATGCTGCACTGCGCGATCAAGTTCGACAATATGAGGTTAGGTGGTTAGAGTATGAAGCAAAGATGAAATCTATGGAGGAGATGTGGCAAAAGGAAATGACGTCTCTCCAAATGAGTCTTGCTGCTGCAAGAAAGAGCATACCTACTGACCAAGCTCCTGTTCTGCCTGCAAGAACCGGCGATTTGTCACTATGTCATTGTTATGATTCCGAGGGTGCGACATCTGTGGGATCACAAACTCCTGGCACAAGCACACCAATCAAATATTCTACAATTTTTGAATTTGGAACTTTGCAGGATACTAATGGTACTGTGGATGCAGTTAGCAATCTGGTCAAGGAATTTGAGCAGCGGAAGCACACCTTCGATGATGATGCAAAAGCTTTGGTAGAAGCCAAATCAGAAACTAACTTCCACCCTGATTTGGAGCTTCGGAAACTTAAAAAACAGTTTGAAATATGGAAGAATGAGTACAAAGGTAGACTAAGGGAGGCAAAAGTAAAGATTCATAAACTTGGTCATTCTGATGCTGTAAGGAGACGTTGGAAATGGTGGGGAAAGTAA 3240 41.57 MMLASSPSTIARSSLEVMLDSLRRRDENDKDKDLPPALPVRPTSKGRLPPARRSLPIDFKVGDEGIPQCSVSELHGKEETKRKEKDFESRKGSFGSKRMKKDQNEESPYAIALENCRSDYMGESNGAAASPENVGDSEWDDNVGYFIKKKLLVWCPLPNGKWEPGTIQSSTEEEAVVLLSKGEVMKVSTVQLLPANPAILEGVDDLIQISYLNEPSVVHNLRQRFSQDKIYSKAGPVLIAINPFKDVGCNGNDVVMAYQQKLVDSPHIYATTDTAYNQMMSDGINQSIIISGESGAGKTETAKVAMQYLASLGGGSLGLDKGILQTNYILEAFGNAKTSRNNNSSRFGKLIEIHFSTLGKICGAKIQTFLLEKQSRVAQLAQGERSYHVFYQLCAGAPSLLKGRLNLKDAWEYKYLNQSECIVIDGVDDARKFNILEEALDTIQICKEDQENAFSMVVAILWLGNISFKAIDSENRVEVVADEALLSAAKLMGCSSQELMLVLSTQNIKAGKDTIAKKFTLRQAMDTRDALAKFIYSNLFDWLVEQINKSLAVGKRCIERSISILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEDYEVDGIDWTEVNFEDNQECLNLIEKKPLGILALLDEESKFPNATDLTFANKLKHHLNGNSCFKGERGRAFGVHHYAGAVVYDTNGFLEKNRDPLPSESIQFLSSCSSKLLQLFASKVLTQKAAVSQYHMGTLESHKLSVGAKFKIGALEEKRKQILNGIVGLQKFFRGNLARRHFYDLRNEAMTLQSFIRGENARREYIVRVTTNNKLQAIIQLQSVIRGWLVRRRHCEMLVLKKQSYDDVKTKPKHSWRISEVMPEEKIEILPTGLAELQMRVLKAESTLEKKEEENAALRDQVRQYEVRWLEYEAKMKSMEEMWQKEMTSLQMSLAAARKSIPTDQAPVLPARTGDLSLCHCYDSEGATSVGSQTPGTSTPIKYSTIFEFGTLQDTNGTVDAVSNLVKEFEQRKHTFDDDAKALVEAKSETNFHPDLELRKLKKQFEIWKNEYKGRLREAKVKIHKLGHSDAVRRRWKWWGK 1079
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3891843 3901836 + Bpe003874.1 Bpe11g00503 110648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00503 1079 PRINTS Myosin heavy chain signature 561 589 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 PRINTS Myosin heavy chain signature 614 642 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 PRINTS Myosin heavy chain signature 231 250 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 PRINTS Myosin heavy chain signature 328 355 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 PRINTS Myosin heavy chain signature 285 310 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 MobiDBLite consensus disorder prediction 21 36 - -
Bpe11g00503 1079 SMART iq_5 759 781 IPR000048 GO:0005515
Bpe11g00503 1079 SMART iq_5 811 833 IPR000048 GO:0005515
Bpe11g00503 1079 SMART iq_5 782 804 IPR000048 GO:0005515
Bpe11g00503 1079 Gene3D - 385 441 - -
Bpe11g00503 1079 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Bpe11g00503 1079 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Bpe11g00503 1079 Gene3D - 764 811 - -
Bpe11g00503 1079 MobiDBLite consensus disorder prediction 74 107 - -
Bpe11g00503 1079 Gene3D Kinesin motor domain 200 572 IPR036961 -
Bpe11g00503 1079 Gene3D - 573 738 - -
Bpe11g00503 1079 PANTHER MYOSIN-2 ISOFORM X1 35 749 - -
Bpe11g00503 1079 Coils Coil 872 906 - -
Bpe11g00503 1079 Gene3D Myosin VI head, motor domain, U50 subdomain 442 550 - -
Bpe11g00503 1079 Pfam Myosin head (motor domain) 203 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 148 197 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 ProSiteProfiles IQ motif profile. 762 789 IPR000048 GO:0005515
Bpe11g00503 1079 Pfam IQ calmodulin-binding motif 787 803 IPR000048 GO:0005515
Bpe11g00503 1079 Pfam IQ calmodulin-binding motif 764 780 IPR000048 GO:0005515
Bpe11g00503 1079 Pfam IQ calmodulin-binding motif 814 832 IPR000048 GO:0005515
Bpe11g00503 1079 PANTHER MYOSIN-2 ISOFORM X1 749 1079 - -
Bpe11g00503 1079 MobiDBLite consensus disorder prediction 21 107 - -
Bpe11g00503 1079 SMART MYSc_2a 195 822 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe11g00503 1079 CDD MYSc_Myo8 215 749 IPR036022 -
Bpe11g00503 1079 PANTHER MYOSIN 35 749 - -
Bpe11g00503 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 835 IPR027417 -
Bpe11g00503 1079 PANTHER MYOSIN 749 1079 - -
Bpe11g00503 1079 ProSiteProfiles Myosin motor domain profile. 201 749 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00503 Bpe-Chr11:3891843 Bpe15g01399 Bpe-Chr15:21882194 3.65E-59 dispersed
Bpe11g00503 Bpe-Chr11:3891843 Bpe03g00819 Bpe-Chr3:28148861 3.34E-88 wgd
Bpe11g00503 Bpe-Chr11:3891843 Bpe08g01157 Bpe-Chr8:13348779 3.24E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00503 K10357 - qsu:112007399 1038.87