Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00504 GTAATGGCGGCCAATGGTAGCTCCACTGCTCTCAGAAATACCCCATTCTTGGGTCAGAACAGAGCATCTAGCTCTCACTCTCTCAGAGATGTTGTTTCCATGGGCAATGGAAAGTACTCCATGGGTCTTGACTTGTGGTATGGACCAGACAGAGTCAAGTACTTGGGACCATTTTCAGCTCAGACCCCCTCATATCTCACCGGAGAATTTCCCGGTGACTATGGTTGGGACACCGCCGGACTATCTGCCGATCCAGAGGCATTCGCCAAGAACAGAGCACTTGAGGTAATCCACGGAAGGTGGGCAATGCTCGGAGCACTCGGATGCATTACCCCAGAAGTCCTCCAAAAATGGCTCAATGTAGACTTCAAAGAGCCAGTCTGGTTCAAAGCAGGATCACAAATCTTCACAGAAGGAGGATTAGACTATCTCGGAAACCCCAATCTCGTTCACGCCCAAAGCATCCTCGCTGTTCTCGGCATTCAAGTAATTCTAATGGGTCTAGTCGAAGGTTACCGCATCAATGGCTTAGACGGAGTAGGCGAAGGAAACGACCTCTACCCGGGTGGCCAATATTTTGACCCACTTGGTCTGGCTGATGATCCAGTCACTTTCCAAGAGCTCAAAGTGAAAGAAATCAAAAATGGCCGCCTGGCAATGTTCTCCATGTTTGGATTCTTTGTCCAAGCCATTGTTACAGGAAAAGGTCCTCTGGAGAACCTCCTCGACCACCTTGACAACCCAGTTGCTAATAATGCTTGGGTTTATGCCACAAAATTCGCACCTGGATCA 792 49.12 VMAANGSSTALRNTPFLGQNRASSSHSLRDVVSMGNGKYSMGLDLWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWLNVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGIQVILMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFQELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3902721 3903826 - Bpe024759 Bpe11g00504 110649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00504 264 Pfam Chlorophyll A-B binding protein 63 230 IPR022796 -
Bpe11g00504 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 4 264 - -
Bpe11g00504 264 Gene3D Chlorophyll a/b binding protein domain 53 257 - -
Bpe11g00504 264 SUPERFAMILY Chlorophyll a-b binding protein 45 261 - -
Bpe11g00504 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 4 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00657 Bpe-Chr7:13286472 Bpe11g00504 Bpe-Chr11:3902721 1.27E-125 dispersed
Bpe11g00504 Bpe-Chr11:3902721 Bpe14g00731 Bpe-Chr14:5674397 1.15E-125 dispersed
Bpe13g01150 Bpe-Chr13:16960616 Bpe11g00504 Bpe-Chr11:3902721 2.61E-65 transposed
Bpe11g00504 Bpe-Chr11:3902721 Bpe08g01156 Bpe-Chr8:13346939 1.36E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00504 K08914 - mnt:21401705 499.204