Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00516 ATGAAACGAGGATACCAAGCTTCTCCATCGACTTCTCTTGGGCCTCCAAAATCCAGAGTTAAGTATAACCCAGAAGGTGATGCTGAGTTTTTAGAAGATGAAAGCACGAAGTTATTTGCCAGGAAAGTGGCTGACCATTACAGTGCTAGGACTAATCAGACTCTAGAAGAAAGGGAAAATAGTCCAATTATCCACTTAAAGAAACTTAACAACTGGATTAAGAGTGTTTTGATTCAACTCTACGCTCGCCAAGGTGATGCTGTTCTAGATCTTGCTTGTGGAAAGGGTGGTGATCTTATCAAATGGGATAAGGCAAAAATTGGATATTATGTTGGAGTTGATATTGCTGAAGGCTCTATAGAGGACTGTCGAACGCGCTACAATGGTGATGCAGACCATCACCAGCGTCGTAAAAAGTTCACCTTTCCTGCCCGCCTTGTTTGTGGAGATTGTTACGAGTTTTATCATAGAAGACATGAAATGACTGCTGCCTGTTGTTTAAGTTATAGTTTTGAACTTTGTACTATTTTGCAGTTTGCCATGCATTATTCTTGGTCTACCGAGGCACGTGCTCGAAGAGCGCTGGCTAATGTGTCATCTCTACTTCGGCCTGGGGGAATATTTATTGGGACAATGCCAGATGCTAATGTGATTGTCAAAAAGCTCAGAGAAGGTGAAGATTTGGGCTTTGGAAACAGTGTCTACTCGATACGGTTTGATGAAGAATATTCAGAAAAGGCTAGTACCTTCAAAGCTTCCAGCCCCTTTGGCATAAAGTATCAGTTTCATCTTGAGGATGCTGTTGATTGTCCTGAATGGATTGTCCCTTTCAATATCTTCAAAGCCTTGGCAGAAGAATACGATCTAGAGCTCGTCTTTGTGAAGAACTCGCATAATTTTGTGCACGAGTACTTGAAGAGGCTGGAATATGTTGAACTCATGAGGAGGCTCGGTGCGTTGGGCGATGGAAATCAAGATCAGAGCACATTATCAGCAGATGAATGGGAAGTGGCTTATTTGTACCTTGCATTTGTTTTGAAAAAGATGATTAAGCAGATCGAATCCTACTACGAAGAAGCAAAGTGGCTGGATAAGAAATATATGCCAACGTTTGATGAATATATAAGTGTAGCTTCAACGTCATTCGGTTATGCTTTGCTTTTGACAATCGCTTTCGCCGGAATGAGTTCTGAGGCTGCTAAGAAAGATGACTTTGACTGGCTAGTCAGTGAACCTAAGTTTCTTAAAGCTGTGGAGTTAATTTGCAGGCTACTTGACGACCTAGTTTCAAGCAAGCTGGAGAAACAACGAAGCCACATACCAACATCTGTGGAATGCTATATAAACCAGCACAAGGTATCTGAAGAAGAAGCTATCACCGCATTGAAGAAGAAGATTTCAGATTCATGGAAGGATTTAAACGAAGAAATTATGAAGCCAACGACTGTGTCGAGGCCTCTTTTGATTCTGATTCTTCATCTTGTTCGAGTCGTGGAAGAGCTCTATAAGGAAGAAGATGCATATACCGGTAACGGAAAGCGTCTTCAAGATGGAATTTCTGCCATGTTTGGCGATGCATTTTCTATTTGA 1590 41.57 MKRGYQASPSTSLGPPKSRVKYNPEGDAEFLEDESTKLFARKVADHYSARTNQTLEERENSPIIHLKKLNNWIKSVLIQLYARQGDAVLDLACGKGGDLIKWDKAKIGYYVGVDIAEGSIEDCRTRYNGDADHHQRRKKFTFPARLVCGDCYEFYHRRHEMTAACCLSYSFELCTILQFAMHYSWSTEARARRALANVSSLLRPGGIFIGTMPDANVIVKKLREGEDLGFGNSVYSIRFDEEYSEKASTFKASSPFGIKYQFHLEDAVDCPEWIVPFNIFKALAEEYDLELVFVKNSHNFVHEYLKRLEYVELMRRLGALGDGNQDQSTLSADEWEVAYLYLAFVLKKMIKQIESYYEEAKWLDKKYMPTFDEYISVASTSFGYALLLTIAFAGMSSEAAKKDDFDWLVSEPKFLKAVELICRLLDDLVSSKLEKQRSHIPTSVECYINQHKVSEEEAITALKKKISDSWKDLNEEIMKPTTVSRPLLILILHLVRVVEELYKEEDAYTGNGKRLQDGISAMFGDAFSI 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4001010 4011185 - Bpe003884.1 Bpe11g00516 110661

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00516 529 CDD AdoMet_MTases 88 209 - -
Bpe11g00516 529 MobiDBLite consensus disorder prediction 1 25 - -
Bpe11g00516 529 PANTHER MRNA CAP GUANINE-N7 METHYLTRANSFERASE 1 351 - -
Bpe11g00516 529 ProSiteProfiles mRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.56) domain profile. 22 356 IPR004971 -
Bpe11g00516 529 Pfam Terpene synthase family, metal binding domain 345 472 IPR005630 GO:0000287|GO:0010333|GO:0016829
Bpe11g00516 529 Gene3D Vaccinia Virus protein VP39 58 349 IPR029063 -
Bpe11g00516 529 Pfam mRNA capping enzyme 32 348 IPR004971 -
Bpe11g00516 529 PANTHER MRNA GUANINE-7- METHYLTRANSFERASE 1 351 IPR039753 GO:0004482
Bpe11g00516 529 SUPERFAMILY Terpenoid synthases 342 523 IPR008949 -
Bpe11g00516 529 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 70 348 IPR029063 -
Bpe11g00516 529 MobiDBLite consensus disorder prediction 1 17 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00516 K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56] - tcc:18593728 593.578
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00516 Bpe-Chr11:4001010 Bpe11g00586 Bpe-Chr11:4454565 4.01E-51 dispersed
Bpe03g00383 Bpe-Chr3:12226067 Bpe11g00516 Bpe-Chr11:4001010 3.72E-34 transposed
Bpe04g01913 Bpe-Chr4:24088604 Bpe11g00516 Bpe-Chr11:4001010 3.37E-19 transposed
Bpe01g00373 Bpe-Chr1:2351200 Bpe11g00516 Bpe-Chr11:4001010 6.63E-13 wgd
Bpe11g00516 Bpe-Chr11:4001010 Bpe03g00808 Bpe-Chr3:28028211 3.36E-35 wgd
Bpe11g00516 Bpe-Chr11:4001010 Bpe09g00225 Bpe-Chr9:1599008 3.19E-34 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g391 . . . . . . . . . . Cma01g01165 . . . . . Cpe02g00737 Bhi09g01965 Tan01g4483 . . Hepe01g1328 . . . . . . . . . . Cone9ag0116 . . Lsi04g01258 . Chy04g01032 . . . . . Bpe11g00516 . . Bma14g00368 . Cmo01g01220 . . . . Car16g00578 . . . . . . . . . Cla05g01557 Cam05g1664 Cec05g1669 Cco05g1709 Clacu05g1659 Cmu05g1552 Cre05g1664 . . . Cme04g00774
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004967 1 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 4 4 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g00516 Bpe_Chr11 FPKM 26.561102 26.172768 218.278214 213.825806 31.4807 36.539177 31.039221 89.943634 91.452148 91.314758