Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00518 ATGGACTCCCACCAGCTCTTTGGGTACTCGTCATCTTCTCCAAACGTCCCAAGTAGAGTGCTCAGCTCTTTGAATTACAACGTTGGAAACTTTCCCAATTCTTCCTTTTTATCTCCAATCGATTCAGATTCTATTACAAACTTGAGTGATAGTCAAGAGCAAAGCTCGACTGATAATCTTTCTGGAGTCAGCCCTTCGTGTAACTCTTCGATCGACACGAACAGCTGTTTCCTTCCCATCAGCAATTCACCAGATTATTGCCAAGAGAGTCCACCGCTTTATCTTGGTGCGGCTGAGTTTTCACGGGATGTGAGCTCGATCCGAAACATAAGCCACACTTTACACGAATTAGAGACTGCTCTTATGGGACCCGATGAAGAGAAAGACGAAATCAGCAAACCAAATTCTTCTTTTGGTGAAAGTAGTAGATCTCAAAAACTGGAACAGGGATCAATGTTATGGAGCCAAGAATGCCATGACTCATCCGCTATCCTTTCTCAGCCTTCGTTCGTCTCTCGACGCAGGCAGACAGACGAAGTGGTCCGTACTGATAAACGACAGAAGTCAATGGAGGACGACTCTTTGGAGGGATTTCCATCTGGCAATTTGAAGCAACTACTGATTGCTTGTGCCAAAGCTCTAGCAGAGAATAAATTGGCCAATTTTGATAAGTTGGTTGAGAAGGCAAGAAGTGCTGTCTCGGTAAGTGGAAACCCAATACAAAGACTTGGAGCTTATATGGTAGAAGGACTTGTCGCAAGGAAGGAGGAATCGGGTGCTAATATCTACCACGCCCTTAAGTGCAGGGAGCCAGAAAGTAGTGATTTATTATCGTACATGCACATTCTTTATGAAATTTGCCCTTATTTGAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCAGAAGCTTGCAAGAATGAAGATTGCATCCATATAATAGACTTTCAGATTGCTCAAGGGACCCAGTGGATGACTCTCCTTCAAGCACTTGCGGCCAGACCTGGTGGGCCACCCTGCGTAAGGATTACTGGTATCGATGACCCTGTTTCTAAATATGCTCGAGGGGGCGGATTAGAGGCGGTGGGAAGGAGATTGGCTAAAATATCGGAAAATTTCCAGATCCAAGTAGAGTTTCAAGGAGTGCCCATTTTTGCTCCAAATGTCACCCTTGACATGCTCGATGTAAGGCCTGGGGAGGCTCTAGCCGTGAATTTCCCTCTGCAACTCCATCACACCCCAGACGAGAGCGTTGATGTACGTAATCCTCGAGACAAGCTTTTAAGAACCATCAAAGCGCTCTCTCCCAAAGTTGTCACATTGGTCGAGCAAGAATCAAACACGAACACGACGCCTTTCTTCTACAGGTTTGTCGAAGCACTTGAGTATTATTTGGCCATGTTTGAGTCGATAGATGTTACTCTTCCAAGAAATAGCAAGCAGCGTATAAATGTGGAGCAGCATTGTTTAGCACGAGATATCGTTAATGTCATCGCTTGTGAGGGGACTGAAAGGGTAGAGCGGCACGAGCTCTTTGGGAAATGGAAGTCGAGGTTGACGATGGCCGGATTTAAGCAGTTTCCATTGAGCTCTTATGTGAATTCTGTCATAAGGAGCTTACTAAAGTGCTATTCCGAGCATTACACGCTGGTCGAAAAAGACGATGCCATGCTGTTGGGTTGGAAGGAAAGGAACCTTATATCTGCATCGGCTTGGTACTGA 1722 45.47 MDSHQLFGYSSSSPNVPSRVLSSLNYNVGNFPNSSFLSPIDSDSITNLSDSQEQSSTDNLSGVSPSCNSSIDTNSCFLPISNSPDYCQESPPLYLGAAEFSRDVSSIRNISHTLHELETALMGPDEEKDEISKPNSSFGESSRSQKLEQGSMLWSQECHDSSAILSQPSFVSRRRQTDEVVRTDKRQKSMEDDSLEGFPSGNLKQLLIACAKALAENKLANFDKLVEKARSAVSVSGNPIQRLGAYMVEGLVARKEESGANIYHALKCREPESSDLLSYMHILYEICPYLKFGYMAANGAIAEACKNEDCIHIIDFQIAQGTQWMTLLQALAARPGGPPCVRITGIDDPVSKYARGGGLEAVGRRLAKISENFQIQVEFQGVPIFAPNVTLDMLDVRPGEALAVNFPLQLHHTPDESVDVRNPRDKLLRTIKALSPKVVTLVEQESNTNTTPFFYRFVEALEYYLAMFESIDVTLPRNSKQRINVEQHCLARDIVNVIACEGTERVERHELFGKWKSRLTMAGFKQFPLSSYVNSVIRSLLKCYSEHYTLVEKDDAMLLGWKERNLISASAWY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4035595 4037316 - Bpe003886.1 Bpe11g00518 110663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00518 573 PANTHER CHITIN-INDUCIBLE GIBBERELLIN-RESPONSIVE PROTEIN 1 11 572 - -
Bpe11g00518 573 Coils Coil 212 232 - -
Bpe11g00518 573 MobiDBLite consensus disorder prediction 121 146 - -
Bpe11g00518 573 MobiDBLite consensus disorder prediction 175 193 - -
Bpe11g00518 573 Pfam GRAS domain family 203 572 IPR005202 -
Bpe11g00518 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 572 IPR005202 -
Bpe11g00518 573 MobiDBLite consensus disorder prediction 169 195 - -
Bpe11g00518 573 ProSiteProfiles GRAS family profile. 194 573 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00134 Bpe-Chr9:908298 Bpe11g00518 Bpe-Chr11:4035595 1.56E-169 dispersed
Bpe11g00518 Bpe-Chr11:4035595 Bpe11g01481 Bpe-Chr11:11017199 4.95E-75 dispersed
Bpe11g00518 Bpe-Chr11:4035595 Bpe14g00729 Bpe-Chr14:5656426 1.34E-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22040 PF03514 GRAS 1.20E-129 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00518 - - zju:107431716 811.986