Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00520 ATGCCAACTGTGTGGTTCTCATTCAAGAAATCAATGCACTGCACACCGAAACCCTCGGATGTTCATGATCCTAAATCCAGGAAACATTTGAGCACAATCTTGACCAGAAAAGCGGCACGATGTGGCTGTTCAGCTGGAAGATCAGGCTGTTCAAGGTCCATTGCAAATATCAAAGATGTTATTCATGGGAGTAAAAGACACTTAGAAAAGCCACCTAGTTGTAGCCCTAGATCCATTGGAAGCAGCGAGTTTCTCAATCCAATTACTCATGAAGTAATTTTGAGTAACTCAAAATGTGAGCTCAAAATTTCTGGCTTTGAAGTTGCCGGAAAAGGCGACCCCAGAGCTAGTTCGACGTTTGTAGGCAATTTAAGACCGGGGACGCCAGGGCCAGGGGAAAATCTGGCAATGCATTATTTTAATCAGTCATTGAGGAATTCGTCATCTTCTTCACGGAAGTTTCCATTTCTTGTATCAGAAAGAGAAGGGGGTGGAGCTGCGGATTCTGAGAAATTTGGAAGTAGTAGAATTAACTGTGGTAATCGAACTTCATTGGAGATAGATTCTAATGGAAATGGAAATGGATTTTCTAGAATTAGTTGTCACAAATGTGGAGAGCAGTTCAGCAAATGGGAAGCTGCTGAAGAACATCATCTATCCAATCATGCTGCTAATATTGCTTTTTTCTTTTGTAAAACAGTAACCGAACTTGTGGAAGGCGATTCATCAAGGAAAATCGTCGAAATCATTTGCCAAACAAGCTTACTGAAGTCTGAAAATCACAGTAGCAGAATCGAAAGAGTTCTTAAAGTTCACAACATGCAAAAGACTCTCACTCAATTCGAAGACTACAGAGAATTGGTGAAGATCAAAGCCAGTAAGCTCCAGAAGAAACACCCTCGGTGCCTAGCCGATGGGAATGAGCTGCTGAGGTTTCACGCCACGATCTTGGCCTGCTCGCTCGGTCACGGATCCTCCAGTCTTTGCCGATCGGAGAAATGCTGTGTTTGTCGAATTATACGAAATGGATTTTTGGAGAAGGAGATGAAGGAAGGAATTGGAGTTTTCACGACTTCGACGAGTGAGAGAGCATTGGAATCGATAGAAATAGTGGAAGAGAACTCGTCTCTGAGGAAAGCTTTGATAGTTTGCAGAGTTGTTGCAGGGAGAGTGCACAGGCCATTGGAGAATATTCAAGAAATTTCTGGGCAAACTGGGTTTGATTCAATGGCTGGGAAAGTGGGTTTGTATTCAAATATTGAAGAACTTTACTTGTTGAATCCTAAAGCTCTTCTTCCATGCTTCGTTGTCATCTGCAAAGCTTAG 1326 42.46 MPTVWFSFKKSMHCTPKPSDVHDPKSRKHLSTILTRKAARCGCSAGRSGCSRSIANIKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSKCELKISGFEVAGKGDPRASSTFVGNLRPGTPGPGENLAMHYFNQSLRNSSSSSRKFPFLVSEREGGGAADSEKFGSSRINCGNRTSLEIDSNGNGNGFSRISCHKCGEQFSKWEAAEEHHLSNHAANIAFFFCKTVTELVEGDSSRKIVEIICQTSLLKSENHSSRIERVLKVHNMQKTLTQFEDYRELVKIKASKLQKKHPRCLADGNELLRFHATILACSLGHGSSSLCRSEKCCVCRIIRNGFLEKEMKEGIGVFTTSTSERALESIEIVEENSSLRKALIVCRVVAGRVHRPLENIQEISGQTGFDSMAGKVGLYSNIEELYLLNPKALLPCFVVICKA 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4051556 4053220 - Bpe003888.1 Bpe11g00520 110665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00520 441 PANTHER - 2 441 - -
Bpe11g00520 441 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 441 - -
Bpe11g00520 441 Gene3D - 232 440 - -
Bpe11g00520 441 SUPERFAMILY ADP-ribosylation 234 440 - -
Bpe11g00520 441 ProSitePatterns Zinc finger C2H2 type domain signature. 201 222 IPR013087 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe09g00200 Bpe11g00520 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01435 Bpe-Chr8:15105022 Bpe11g00520 Bpe-Chr11:4051556 1.40E-28 dispersed
Bpe11g00520 Bpe-Chr11:4051556 Bpe11g00729 Bpe-Chr11:5568109 2.64E-53 dispersed
Bpe11g00520 Bpe-Chr11:4051556 Bpe09g00200 Bpe-Chr9:1397029 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22041 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00520 - - lang:109355134 625.55