Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00523 ATGGCATTGTCAGTCGTCAATGGCGGACCAAACGGGTGTAAGGACAGCGGTCCAACAAGCCTTGCAGGCTCCGACTACGGTGGCGTAGAGTTCTCCAGAGAAGACGTTGAAGCTTTGTTGAATGAGAAATTGAAAAGAAAAGACAGATTCAATCTCAAGGAAAAATGTGACAACATGGCGGAATACATTAAAAGGCTTAAACTATGCATCAAATGGTTTCAAGATCTTGAATCTGCCTATTTATTAGAGCAAGAGAGGCTGCATGATCGAATGGAATCAGCCGAGCTGAAATGCTCCGAAATGGAGATATTATTGGAGAATAAGGAAGAAGAGTTGAATTTAATCATTGTCGAGCTTAGAAAGAGCTTCGAGTGTTTGCAAGAGAAGTTTACGATAGAAGAATCAGATAAGTTGGTTGCAATGGACTCTCTAGCGAAAGAGAAAGAGGCTAGACAGAATATTGAGAGGTCACAGGCCGCCATTGTGGAAGAACTTGGTAAAGCTCAAAGAGAGCTTTCAAGTGCAAATCAGAAGATTACATCGCTTAATGATATGTACAAGCAGTTGCAAGAGTACATCACGAGTTTACAACAATATAATGGAAAACTTCATACGGAGCTGTCGACAGTGGAAGACGACCTGAAACGAATAGAGAAAGAGAAGGCTTCAATGGTGGAAAATCTCAGCTTGTTAAATGGTCAACTTACTTTGTCCAAAGCTTCTCATGATGACGCGATGAAGCAAAAAGAAGCGATGGTGCATGAAGTTTCGTGTCTTAGGCGAGAATTACAGCAAGTGAGGGATGATCGAGATCGTCAACTTTCACAGGTTCAGTCGTTGACAGTTGAAGTCGTCAAGTACAAAGAGAGTGCAGAAACTTGCAATTATGAGCTGGAAATTTTGAAAACTAAGACAAGTGAATTAGAGGCAACATGTTCTTGGCAAGAGGATGAACTAAAGGCCTTGAATAATTATCTATCTGTTGCAGAAAGCAAACTCCAGGTGTCTGATTTATCAGCAATTGCGACGAAGGCTGAGTTTGAAGAGCAAAAGAGACTTATAATCGAGTTACAAAATTGTTTGGATGGTGCAGAAACAAAGCTTTCAGAAGGAGAGAAGTTGCGAAAGAAGTTACATAATACCATCTTGGAACTTAAAGGGAACATTCGGGTGTTCTGTAGAGTTCGCCCTTTAATACCTGAAGATGGTTTTAGCTCAGAAGGAAAAATTTTCTCCTATCCCTCGTCAGTTGAAGCCCTTGGACGAGGAATTGACGTAATGCAAAATGGGCAGAGACATTCTTTTACGTTCGATAAAGTATTTATGCCCACGTCAACCCAAGAGGACGTGTTTGTGGAAATTTCGCAACTTGTACAAAGTGCGCTAGATGGTTATAAGGTTTGTATTTTTGCTTATGGACAAACTGGATCGGGCAAGACTTACACAATGATGGGTGGGCCCGGCCTCCAAGAACTAAGAGGGTTGATACCTCGATCGTTGGAACAAATATTTCAAACAAGACAATCTCTTCAACCTCAAGGTTGGAAATATGAAATGCAGGTGTCGATGCTGGAAATCTATAACGAAAATATTCGTGATTTGCTCGGGATTCATCGATCATATTCAGATTCTTCACGACTTGAGAATTGTAGTCCCGGAAAGCAATATGCGATAAAACACGACGTAAGTGGAAACACACATGTCTCTGATCTCACAGTGGTGGATGCTCGTAGCGTGAAAGAGGTCTCGTTTCTTTTAGATCAAGCTGCTCGTAGCAGATCTGTTGGGAAAACCCAAATGAATGAGGAATCTTCAAGAAGTCATTTTGTGTTCACTCTTCGAATATTCGGTGTAAACGTGAGCACGGATCAACAAGTGCAAGGCGTTTTGAATCTGATCGATCTTGCCGGGAGCGAACGTCTTTCCAAGAGCGGATCGACTGGAGACCGATTGAAAGAAACTCAAGCTATTAATAAAAGTCTGTCATCTCTAAGTGATGTTATATTTGCTTTGGCAAAGAAGGAAGAGCATGTACCATTTAGAAACTCAAAACTTACATATCTTCTTCAGCCTTGTCTCGGGGGCGATTCGAAGACGTTGATGTTTGTAAATATATCACCCAACCCTTCTTCGCTTGGCGAATCGCTCTGCTCCCTCCGCTTTGCCGCTCGTGTTAATGCTTGTGAAATTGGAACTCCTCGCCGCCAAACAAATTCACGCCGAACCGAGATATTCACGACCCAACTGTGA 2250 42.04 MALSVVNGGPNGCKDSGPTSLAGSDYGGVEFSREDVEALLNEKLKRKDRFNLKEKCDNMAEYIKRLKLCIKWFQDLESAYLLEQERLHDRMESAELKCSEMEILLENKEEELNLIIVELRKSFECLQEKFTIEESDKLVAMDSLAKEKEARQNIERSQAAIVEELGKAQRELSSANQKITSLNDMYKQLQEYITSLQQYNGKLHTELSTVEDDLKRIEKEKASMVENLSLLNGQLTLSKASHDDAMKQKEAMVHEVSCLRRELQQVRDDRDRQLSQVQSLTVEVVKYKESAETCNYELEILKTKTSELEATCSWQEDELKALNNYLSVAESKLQVSDLSAIATKAEFEEQKRLIIELQNCLDGAETKLSEGEKLRKKLHNTILELKGNIRVFCRVRPLIPEDGFSSEGKIFSYPSSVEALGRGIDVMQNGQRHSFTFDKVFMPTSTQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGGPGLQELRGLIPRSLEQIFQTRQSLQPQGWKYEMQVSMLEIYNENIRDLLGIHRSYSDSSRLENCSPGKQYAIKHDVSGNTHVSDLTVVDARSVKEVSFLLDQAARSRSVGKTQMNEESSRSHFVFTLRIFGVNVSTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPNPSSLGESLCSLRFAARVNACEIGTPRRQTNSRRTEIFTTQL 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4068526 4072549 + Bpe003890.1 Bpe11g00523 110668

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00523 749 Coils Coil 165 192 - -
Bpe11g00523 749 Pfam Kinesin motor domain 394 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 ProSiteProfiles Kinesin motor domain profile. 388 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 Coils Coil 200 234 - -
Bpe11g00523 749 MobiDBLite consensus disorder prediction 1 20 - -
Bpe11g00523 749 Coils Coil 249 276 - -
Bpe11g00523 749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 346 726 IPR027417 -
Bpe11g00523 749 PRINTS Kinesin heavy chain signature 598 615 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 PRINTS Kinesin heavy chain signature 629 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 PRINTS Kinesin heavy chain signature 678 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 Gene3D Kinesin motor domain 329 730 IPR036961 -
Bpe11g00523 749 SMART kinesin_4 386 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe11g00523 749 Coils Coil 91 111 - -
Bpe11g00523 749 ProSitePatterns Kinesin motor domain signature. 628 639 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bpe11g00523 749 PANTHER KINESIN-LIKE PROTEIN 2 742 - -
Bpe11g00523 749 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 742 - -
Bpe11g00523 749 CDD KISc_C_terminal 386 730 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00523 K10405 KIFC1; kinesin family member C1 - csv:101215636 1101.27
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00334 Bpe-Chr8:1980252 Bpe11g00523 Bpe-Chr11:4068526 0 dispersed
Bpe11g00523 Bpe-Chr11:4068526 Bpe13g00050 Bpe-Chr13:1421805 5.06E-91 dispersed
Bpe11g00523 Bpe-Chr11:4068526 Bpe07g00107 Bpe-Chr7:763497 2.77E-88 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g417 Blo03g00584 . Bda07g00337 . . . . . . . Cma01g01154 Cma09g00922 . Car09g00838 . Cpe06g00742 Cpe02g00747 Bhi09g01950 . . . . . . . . . . . . . Cone6ag0089 Cone9ag0105 . . Lsi04g01248 . . . . . . . Bpe11g00523 . . Bma14g00358 . Cmo01g01207 Cmo09g00919 . . . Car16g00566 . . . . . . . . . Cla05g01542 Cam05g1650 Cec05g1655 Cco05g1694 Clacu05g1643 Cmu05g1538 Cre05g1648 . . . Cme04g00801
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006975 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 0 1 1 34
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g00523 Bpe_Chr11 FPKM 15.163078 16.336197 18.256609 19.591051 13.425724 13.265084 16.02935 19.622089 19.209482 20.102331