Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00524 | ATGGTTTCGCCAGAAACCACTGATTGGCTCTACGACTACGGAGTGATCGAAGATATCCCTGTCCATGATGGGAATTTCTCTGTTTCAAATTCTGGGTTTTCTTGGCCTGTGCAGGCCTTGAACGACTCATCTAATGTCAGGGTGCATAAATTTGCTAGTGAACATGTATCCTCTGCTACACGTGTTTTCAATGACAGGGTTAGATCTGAATCAAGTTCTGTATCCAGCTCCAAAGCATGCAGAGAGAAGCTGAGGAGAGACAGGCTGAATGACAAGTTTCTGGAATTGGGCTCTATTCTGGATCCCAGAAGACCCCCCAAAACAGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGCTGAGAAGAATGAACTCAGGGATGAAAAGCAGAGGCTGAAGGCAGAAAAAGAGACAATAGAGCATCAATTGAAGAACATGAATTCTCAGCCCAGCTTCCTGCCTCCAGCCACCGCAATCCCAGCCGCATTTGCTGCTCAAGGGCAAGCTCCTGGCAATAAGTTGGTGCCTTTCCTTACCTACCCCGGAGTGGCAATGTGGCAGTTCATGCCTCCTGCTGCAGTGGACACCTCGCAGGATCACGTTCTCCGCCCACCCGTTGCTTAA | 627 | 48.64 | MVSPETTDWLYDYGVIEDIPVHDGNFSVSNSGFSWPVQALNDSSNVRVHKFASEHVSSATRVFNDRVRSESSSVSSSKACREKLRRDRLNDKFLELGSILDPRRPPKTDKAAILVDAVRMAEKNELRDEKQRLKAEKETIEHQLKNMNSQPSFLPPATAIPAAFAAQGQAPGNKLVPFLTYPGVAMWQFMPPAAVDTSQDHVLRPPVA | 208 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4073329 | 4076145 | + | Bpe003891.1 | Bpe11g00524 | 110669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00524 | 208 | PANTHER | TRANSCRIPTION FACTOR ILR3 | 1 | 120 | - | - | |
Bpe11g00524 | 208 | PANTHER | TRANSCRIPTION FACTOR ILR3 | 121 | 208 | - | - | |
Bpe11g00524 | 208 | Pfam | Helix-loop-helix DNA-binding domain | 77 | 119 | IPR011598 | GO:0046983 | |
Bpe11g00524 | 208 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 73 | 124 | IPR011598 | GO:0046983 | |
Bpe11g00524 | 208 | PANTHER | BHLH TRANSCRIPTION FACTOR | 1 | 120 | IPR044818 | GO:0003700|GO:0006355|GO:0046983|GO:0055072 | |
Bpe11g00524 | 208 | PANTHER | BHLH TRANSCRIPTION FACTOR | 121 | 208 | IPR044818 | GO:0003700|GO:0006355|GO:0046983|GO:0055072 | |
Bpe11g00524 | 208 | Gene3D | - | 76 | 154 | IPR036638 | GO:0046983 | |
Bpe11g00524 | 208 | CDD | bHLH_AtILR3_like | 78 | 145 | - | - | |
Bpe11g00524 | 208 | SMART | finulus | 79 | 132 | IPR011598 | GO:0046983 | |
Bpe11g00524 | 208 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 71 | 133 | IPR036638 | GO:0046983 | |
Bpe11g00524 | 208 | Coils | Coil | 119 | 150 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe09g00195 | Bpe11g00524 | CCT | |
Bpe08g01142 | Bpe11g00524 | CCT | |
Bpe09g00195 | Bpe11g00524 | ECH | |
Bpe08g01142 | Bpe11g00524 | ECH | |
Bpe03g00805 | Bpe11g00524 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00524 | Bpe-Chr11:4073329 | Bpe13g00563 | Bpe-Chr13:12826572 | 1.03E-19 | dispersed | |
Bpe11g00524 | Bpe-Chr11:4073329 | Bpe14g00694 | Bpe-Chr14:5450124 | 9.41E-45 | wgd | |
Bpe11g00524 | Bpe-Chr11:4073329 | Bpe03g00805 | Bpe-Chr3:27979792 | 4.68E-47 | wgd | |
Bpe11g00524 | Bpe-Chr11:4073329 | Bpe08g01142 | Bpe-Chr8:13277068 | 3.49E-99 | wgd | |
Bpe11g00524 | Bpe-Chr11:4073329 | Bpe09g00195 | Bpe-Chr9:1381713 | 2.18E-96 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22042 | PF00010 | HLH | 1.80E-08 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00524 | - | - | pvy:116128739 | 276.559 |