Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00542 ATGATGAACATTTACATTGCAGCCTTCATCTTCATAATCCTCATTTTCCTACTTCTTACCAGAAGAACCAAATCATCCCAAAGGCTCCCTCCTGGCTCACTTGGAATTCCCTACATAGGCCAGAGCATTAGCTTTCTCCAAGCCATGAGAAAAAACACAGCAGAACAATGGCTGCAACAAAGGATCAGAAAGTATGGACCAGTCTCCAAGCTCAGTCTCTTTGGTAAACCGACTGTTTTCATTAGTGGACAGGCTGCCAATAAGTTCGCTTTCACAGGTGACGATACCACCCTCAGTAACCAACAAGTCAAGTCCCTCACAATGATCTTAGGCGACCACAACATACTTGAGCTCACCAGCGAAGATCATAAACGTGTTAGAGGTGCCCTCCTTTCGTTCCTGAAACCGGATTCGCTGAAAAAGTATATCGGAATAATGGAAGGGGAAGTAAGGGAGCATCTCAAGAGCCATTGGCAGGGACAAAAAGAAGTTTCTTGTTTTTTCATTTTTGAACAGGTCATGCCATTGATGAAGACACTCACGTTCAACGTGATATGTTCTCTTCTGTTCGGAATCGAGAAAGGAATCACTAGAGATAAATATATGGACTGCTTTGAAACGATGTTGAAAGGAGTGTGGGCAGTGCCGATCGACTTGCCGTTCACTCGATACAACCGGGGCGTGCGGGAGAGTAGACGGGTGCAAGGGATGTTGAAGGAACTTATCGACGTGAAGAGAGTAAAACTCGAAAAGGAGGTCGATTCTCAGCCTCAAGACCTGATCTCTCACTTGCTTAGCGTTCAAAAAGAAAGCAGCAAAGACGGAATAAGTGAGAAGGAAATCGTGCACAATGCTTTGACTGTCATGATTGCGGGATACGACACAACTTCTGTCTTGCTCACTTTCATGATGAGGCTTCTGGCTAACGATCCTGCTGTTTATGGAGCTGTTCTTCAAGAGCATGAAGAGATAGAAAAAAGCAAGCTCCATGGAGAATCACTGACATGGGAAGATCTAAACAAGATGAAGTACACATGGAGGGTAGCCATGGAAACATTGAGAGTCGTCCCTCCCGTGTTTGGTGGATTCAGACAGGTTCTAAAAGATGTCGAATTTGATGGGTATCTTATTCCAAAAGGATGGCAAATTTTCTGGGCGACATTGATGACTCACATGGACGGAGACATATTCCCTGAGCCATCGAAGTTCGATCCGAGTAGATTCGAAAGCCAAGCATCGATTCCTCGTTTTTGCTTTGTGGCTTTCGGGGGCGGACCGAGAGTCTGTCCAGGCAATGAGTTTGCAAGGATTGAGACTCTTGTTACCATTCATTACCTCATAACTCACTTCACATGGAAGCTCACTGCGGATGATCTTTTCATCAGAGATCCCACGCCAATACCAACTGAAGGATTACCGATCCAAATTACACAACGGAAACCATTATAA 1449 44.86 MMNIYIAAFIFIILIFLLLTRRTKSSQRLPPGSLGIPYIGQSISFLQAMRKNTAEQWLQQRIRKYGPVSKLSLFGKPTVFISGQAANKFAFTGDDTTLSNQQVKSLTMILGDHNILELTSEDHKRVRGALLSFLKPDSLKKYIGIMEGEVREHLKSHWQGQKEVSCFFIFEQVMPLMKTLTFNVICSLLFGIEKGITRDKYMDCFETMLKGVWAVPIDLPFTRYNRGVRESRRVQGMLKELIDVKRVKLEKEVDSQPQDLISHLLSVQKESSKDGISEKEIVHNALTVMIAGYDTTSVLLTFMMRLLANDPAVYGAVLQEHEEIEKSKLHGESLTWEDLNKMKYTWRVAMETLRVVPPVFGGFRQVLKDVEFDGYLIPKGWQIFWATLMTHMDGDIFPEPSKFDPSRFESQASIPRFCFVAFGGGPRVCPGNEFARIETLVTIHYLITHFTWKLTADDLFIRDPTPIPTEGLPIQITQRKPL 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4164955 4166698 - Bpe003909.1 Bpe11g00542 110687

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00542 482 PANTHER OS07G0520300 PROTEIN 6 478 - -
Bpe11g00542 482 Gene3D Cytochrome P450 19 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 Pfam Cytochrome P450 30 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Bpe11g00542 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PANTHER CYTOCHROME P450 26 6 478 - -
Bpe11g00542 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe11g00542 482 SUPERFAMILY Cytochrome P450 22 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00542 - - - zju:107431816 652.899
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00066 Bpe-Chr9:463300 Bpe11g00542 Bpe-Chr11:4164955 3.12E-121 dispersed
Bpe11g00542 Bpe-Chr11:4164955 Bpe15g01152 Bpe-Chr15:20445765 2.24E-67 dispersed
Bpe11g00542 Bpe-Chr11:4164955 Bpe08g01128 Bpe-Chr8:13204816 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g492 . . Bda07g00355 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe11g00542 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g00542 Bpe_Chr11 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 1.116978 0.0 0.0 1.778669