Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00545 ATGGAAGCGACGCTGAAGCTAATCTTCACCGTCACTTTCTTCATCTCCGCGACTGCTTCTGCTGAATACGTTCGACCTCAACCTCGAAAGAATCTGCAATTTCCATGGGATGGCAAGTCTTCTTCGCTGCCCCAGCAGGTCCATATTTCTTTGGCAGGAGAAAAGCACATGCGAGTGACATGGGTAACTGATGATAAATCTTTGCCTTCCTTTGTGGAATATGGAACATCTACCGGCACTTATAATTCTGTGGCTCAAGGAGAAAGCACCTCTTATAGCTATCTATTATACAATTCGGGAAAAATACACCATGTCGTAATCGGTCCCTTAGAGCCCGACAAAGTTTACTTTTACCGATGTGGAGGACAGGGCCGTGAGTTCCAGCTGAAGACACCTCCAGCTCAATTGCCAATAACTTTTGCTGTGGTGGGAGATTTGGGGCAAACTGGATGGACAAAGTCAACACTGGACCACATCGACCAGTGCAAATATGATGTACATTTGCTTCCGGGCGACCTATCCTATGCTGATTATATGCAGAGACGATGGGACACGTTTGGTGAACTTGTCGAGCCACTTGCTAGTGCAAGGCCATGGATGGTTACGGAAGGAAATCATGAAAAGGAAGGCATACCCTTGTTGAAAGATGGGTTTGAACCTTACAACGCCAGATGGAAGATGCCATTTGAGGAGAGTGGATCAAGTTCAAATCTTTACTATTCTTTTGAAGTTGCAGGTGCTCATATTATTATGCTTGGATCATATACGGATTATGATGAATACTCAGATCAATATAACTGGCTTAAGGCTGATCTAGCGAAGGTGGACAGAAAAAAAACTCCTTGGCTACTTGTCTTATTTCATGCCCCATGGTATAACAGTAACAAGGCACACCAAGGCGAAGGTGATCGGATGATGGAATCCTTTGAGCCCTTGCTTTATGCGGCCGGTGTTGATATAGTGCTTGCTGGTCATGTGCATGCCTACGAACGATCGAAACGAGTCTTTGACAGAAGATCTGATCCATGTGGGGTTGTGCACATAACAATTGGTGATGGTGGAAACCGAGAAGGCTTAGCACACAGCCAGAATGGTCTGTGTTCCGAGAAGCAAGCTTTGGCCATGGTGAACTTAAACTAG 1140 45.44 MEATLKLIFTVTFFISATASAEYVRPQPRKNLQFPWDGKSSSLPQQVHISLAGEKHMRVTWVTDDKSLPSFVEYGTSTGTYNSVAQGESTSYSYLLYNSGKIHHVVIGPLEPDKVYFYRCGGQGREFQLKTPPAQLPITFAVVGDLGQTGWTKSTLDHIDQCKYDVHLLPGDLSYADYMQRRWDTFGELVEPLASARPWMVTEGNHEKEGIPLLKDGFEPYNARWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYTDYDEYSDQYNWLKADLAKVDRKKTPWLLVLFHAPWYNSNKAHQGEGDRMMESFEPLLYAAGVDIVLAGHVHAYERSKRVFDRRSDPCGVVHITIGDGGNREGLAHSQNGLCSEKQALAMVNLN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4177114 4179813 - Bpe003912.1 Bpe11g00545 110690

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00545 379 Gene3D - 135 375 IPR029052 -
Bpe11g00545 379 SUPERFAMILY Purple acid phosphatase, N-terminal domain 35 133 IPR008963 GO:0003993|GO:0046872
Bpe11g00545 379 PANTHER ACID PHOSPHATASE RELATED 7 363 IPR039331 GO:0003993
Bpe11g00545 379 Pfam Calcineurin-like phosphoesterase 139 329 IPR004843 GO:0016787
Bpe11g00545 379 Gene3D - 43 134 - -
Bpe11g00545 379 Pfam Purple acid Phosphatase, N-terminal domain 44 125 IPR015914 GO:0003993|GO:0046872
Bpe11g00545 379 SUPERFAMILY Metallo-dependent phosphatases 137 361 IPR029052 -
Bpe11g00545 379 PANTHER PURPLE ACID PHOSPHATASE 18 7 363 - -
Bpe11g00545 379 CDD MPP_PAPs 137 361 IPR041792 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00545 K22390 ACP7; acid phosphatase type 7 - rcu:8282915 623.624
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00764 Bpe-Chr1:7388948 Bpe11g00545 Bpe-Chr11:4177114 3.10E-87 dispersed
Bpe02g00765 Bpe-Chr2:5483893 Bpe11g00545 Bpe-Chr11:4177114 8.16E-151 dispersed
Bpe06g00393 Bpe-Chr6:15367822 Bpe11g00545 Bpe-Chr11:4177114 2.15E-75 dispersed
Bpe10g00137 Bpe-Chr10:2556820 Bpe11g00545 Bpe-Chr11:4177114 2.11E-81 dispersed
Bpe11g00545 Bpe-Chr11:4177114 Bpe13g01382 Bpe-Chr13:19054543 1.19E-28 dispersed
Bpe11g00545 Bpe-Chr11:4177114 Bpe08g00577 Bpe-Chr8:4049416 1.03E-86 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g498 Blo03g00564 . . . . . . . . . Cma01g01134 Cma09g00948 . Car09g00861 . Cpe06g00763 Cpe02g00767 . . . . . . . . . . . . . . . . . . Lsi04g01205 . . . . . . . Bpe11g00545 . . Bma14g00341 . Cmo01g01185 Cmo09g00946 . . . Car16g00545 . . . . . . . . . Cla05g01492 Cam05g1608 . Cco05g1637 Clacu05g1588 Cmu05g1491 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008020 0 1 1 1 1 1 2 1 1 1 1 1 2 1 2 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g00545 Bpe_Chr11 FPKM 28.384615 27.363836 25.233168 26.096876 28.721056 33.360374 27.258663 27.469343 31.905733 31.301926