Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00552 ATGACTTTAGCTCAAGATCCATTCTACGTTGTTAAGGATGAAATCCAAGAATCTATTGACAAGTTGCAATCAACTTTTCATCGATGGGAGCGTATTTCTGATACAGGAGATAGAGTGCATCTCACAAATGAGCTGCTTGCTAGTTGTGAAAGCATCGAGTGGCAGGTAACCCATATATCTTTCAATCTATGGTTTTCTTTATTTTGTACATTTAAATTTTCACAAAAAAAAAAAAAAAATAAATTTCCCGGAATGCTATTGCTGAAAGCCTGCTTTCTTGATAGGAAGGTGGATGAATTAGACAAGGCTATAGCTGTTGCAGCCAGAGATCTGGCTTGGTATGGCATTGAAGAAGTAGAGCTTGAAAAACGAAAGAGATGGACTAGCACAGCTCGTGCTCAGGTTGGCTCTGTGAAGAAGGTCGTGAAAGCTGGAAAGCAGCGTGATGGCATTACCACTACCGCAATGAATATGAATGGGATCCGTCGAGAACTGTTAAGGTTGCCTAATACTAATGAAAGAGATAGGTCAAATCAATACAACGACCAAGATGATGATGATTTTATAGCTTCGGAATCAGATCGACAGTTGCTTCTCATTAGGCAACAAGACGAGGAATTGGATGAGCTCAGTGCTAGCGTGGAGAGAATCGGAGGAGTTGGACTTACAATACATGACGAACTCCTTGCGCAGGAGAAAATCATTGATGAACTGGGAACAGAAATGGACGCCACATCAAATCGCCTTGATTTTGTCCAGAAAAAGGTAGCTGTGGTCATGAAGAAGGCCGGTATTAAGGGGCAGATGATGATGATTTTGTTTTTAATTGTTTTGTTCATCATCCTCTTTGTGTTGGTCTTCTTAACTTAG 870 40.57 MTLAQDPFYVVKDEIQESIDKLQSTFHRWERISDTGDRVHLTNELLASCESIEWQVTHISFNLWFSLFCTFKFSQKKKKNKFPGMLLLKACFLDRKVDELDKAIAVAARDLAWYGIEEVELEKRKRWTSTARAQVGSVKKVVKAGKQRDGITTTAMNMNGIRRELLRLPNTNERDRSNQYNDQDDDDFIASESDRQLLLIRQQDEELDELSASVERIGGVGLTIHDELLAQEKIIDELGTEMDATSNRLDFVQKKVAVVMKKAGIKGQMMMILFLIVLFIILFVLVFLT 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4234968 4238184 - Bpe003919.3 Bpe11g00552 110697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00552 289 SUPERFAMILY SNARE fusion complex 196 259 - -
Bpe11g00552 289 CDD SNARE_Qc 200 257 - -
Bpe11g00552 289 Coils Coil 235 255 - -
Bpe11g00552 289 Gene3D - 204 266 - -
Bpe11g00552 289 SUPERFAMILY t-snare proteins 5 57 IPR010989 GO:0016020|GO:0016192
Bpe11g00552 289 PANTHER SYNTAXIN 1 288 IPR045242 -
Bpe11g00552 289 Pfam Syntaxin 6, N-terminal 6 57 IPR015260 GO:0016020|GO:0048193
Bpe11g00552 289 Gene3D - 3 63 - -
Bpe11g00552 289 Gene3D - 86 145 - -
Bpe11g00552 289 Pfam SNARE domain 234 285 IPR000727 -
Bpe11g00552 289 PANTHER SYNTAXIN-61 1 288 - -
Bpe11g00552 289 SUPERFAMILY t-snare proteins 93 140 IPR010989 GO:0016020|GO:0016192
Bpe11g00552 289 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 197 259 IPR000727 -
Bpe11g00552 289 SMART tSNARE_6 192 259 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00552 Bpe-Chr11:4234968 Bpe08g01119 Bpe-Chr8:13172770 1.99E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00552 K08500 - qsu:112025744 320.857