Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00552 | ATGACTTTAGCTCAAGATCCATTCTACGTTGTTAAGGATGAAATCCAAGAATCTATTGACAAGTTGCAATCAACTTTTCATCGATGGGAGCGTATTTCTGATACAGGAGATAGAGTGCATCTCACAAATGAGCTGCTTGCTAGTTGTGAAAGCATCGAGTGGCAGGTAACCCATATATCTTTCAATCTATGGTTTTCTTTATTTTGTACATTTAAATTTTCACAAAAAAAAAAAAAAAATAAATTTCCCGGAATGCTATTGCTGAAAGCCTGCTTTCTTGATAGGAAGGTGGATGAATTAGACAAGGCTATAGCTGTTGCAGCCAGAGATCTGGCTTGGTATGGCATTGAAGAAGTAGAGCTTGAAAAACGAAAGAGATGGACTAGCACAGCTCGTGCTCAGGTTGGCTCTGTGAAGAAGGTCGTGAAAGCTGGAAAGCAGCGTGATGGCATTACCACTACCGCAATGAATATGAATGGGATCCGTCGAGAACTGTTAAGGTTGCCTAATACTAATGAAAGAGATAGGTCAAATCAATACAACGACCAAGATGATGATGATTTTATAGCTTCGGAATCAGATCGACAGTTGCTTCTCATTAGGCAACAAGACGAGGAATTGGATGAGCTCAGTGCTAGCGTGGAGAGAATCGGAGGAGTTGGACTTACAATACATGACGAACTCCTTGCGCAGGAGAAAATCATTGATGAACTGGGAACAGAAATGGACGCCACATCAAATCGCCTTGATTTTGTCCAGAAAAAGGTAGCTGTGGTCATGAAGAAGGCCGGTATTAAGGGGCAGATGATGATGATTTTGTTTTTAATTGTTTTGTTCATCATCCTCTTTGTGTTGGTCTTCTTAACTTAG | 870 | 40.57 | MTLAQDPFYVVKDEIQESIDKLQSTFHRWERISDTGDRVHLTNELLASCESIEWQVTHISFNLWFSLFCTFKFSQKKKKNKFPGMLLLKACFLDRKVDELDKAIAVAARDLAWYGIEEVELEKRKRWTSTARAQVGSVKKVVKAGKQRDGITTTAMNMNGIRRELLRLPNTNERDRSNQYNDQDDDDFIASESDRQLLLIRQQDEELDELSASVERIGGVGLTIHDELLAQEKIIDELGTEMDATSNRLDFVQKKVAVVMKKAGIKGQMMMILFLIVLFIILFVLVFLT | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4234968 | 4238184 | - | Bpe003919.3 | Bpe11g00552 | 110697 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00552 | 289 | SUPERFAMILY | SNARE fusion complex | 196 | 259 | - | - | |
Bpe11g00552 | 289 | CDD | SNARE_Qc | 200 | 257 | - | - | |
Bpe11g00552 | 289 | Coils | Coil | 235 | 255 | - | - | |
Bpe11g00552 | 289 | Gene3D | - | 204 | 266 | - | - | |
Bpe11g00552 | 289 | SUPERFAMILY | t-snare proteins | 5 | 57 | IPR010989 | GO:0016020|GO:0016192 | |
Bpe11g00552 | 289 | PANTHER | SYNTAXIN | 1 | 288 | IPR045242 | - | |
Bpe11g00552 | 289 | Pfam | Syntaxin 6, N-terminal | 6 | 57 | IPR015260 | GO:0016020|GO:0048193 | |
Bpe11g00552 | 289 | Gene3D | - | 3 | 63 | - | - | |
Bpe11g00552 | 289 | Gene3D | - | 86 | 145 | - | - | |
Bpe11g00552 | 289 | Pfam | SNARE domain | 234 | 285 | IPR000727 | - | |
Bpe11g00552 | 289 | PANTHER | SYNTAXIN-61 | 1 | 288 | - | - | |
Bpe11g00552 | 289 | SUPERFAMILY | t-snare proteins | 93 | 140 | IPR010989 | GO:0016020|GO:0016192 | |
Bpe11g00552 | 289 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 197 | 259 | IPR000727 | - | |
Bpe11g00552 | 289 | SMART | tSNARE_6 | 192 | 259 | IPR000727 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00552 | Bpe-Chr11:4234968 | Bpe08g01119 | Bpe-Chr8:13172770 | 1.99E-148 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00552 | K08500 | - | qsu:112025744 | 320.857 |