Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00555 ATGGAGTGGAAAAGAGGGTCTTCCATCGGCCGGGGTTCGTCGGCCACTGTGTACTTAGCGACGGCCTTCCCCTCCGGCGAGGCGTTTGCGGTTAAGTCCGGCGAGCTTTCTTCTTCTTCCTCGCTGCGGAAAGAGCAGATATTTTTGTCCGGATTGAGCTCTCCTTACATTGTCAAATACTTGGGTTTTGATGTTAGTGATGAAAACAGAGTGCCCATGTTCAATCTTTTCATGGAGTACGAACCGGGTGGCTCTCTCTCCGACGCGATTCGCCGACATGGCGGTCGATTGGGCGAGGGACTGATCAGATCCTACACTAGACAGATTTTGCGTGGTTTGGATTATCTTCACGATAATGGGTTTGCGCATTGCGATATAAAGAGTGAAAATATATTGGTCGGTAAAGAAGGGGTGAAAATTGCTGATTTGGGTTGTGCTAAATTGGTGGAGAAAGTCACCGGAAAAGTTTCTTTTGGCGGTACACCGGCTTTCATGGCACCGGAAGTCGCGCGCGGTGAAGAACAAGGATTTGAAGCCGACGTGTGGGCCCTTGGCTGTACTTTGATCGAGATGGCAACAGGTAAACATCCATGGCTGGACAGATGTGGCGATCCGGTATCAATTCTTCACATAATCGGGTTTTCCAGCGAATTGCCATTCTTTCCGAGCTGGTTTTCCGAGGATGGTAAGGATTTTTTGAGCAAGTGTTTGAAGAGAGATTCAAAAGAGCGGTGGACGGCTAAGAAACTGCTTGAACATCCATTTCTTGATGAACACAACTCAGATTCAATTACCGGAAAGCAAAGTCCAGCAAATTTCTCAAATTCTCCCAATGGTGTTTTGGAGAAAGGTATTTTCGATTCAGTCCAAGTATTAGAAAGTCCTCTAAATCTAACCCAGCAAAGCTCCTCGACGAGTTCTCCGGCTGAAAGGATAAACAATTTGGTCAGAAAATCGTTTCCCGGGGAAAAATTTCCGGCCAGTTGGACGTTGGACGAAGATTGGATCTCAGTCAGAAGCAACATCAACAACGAAACAGTCGATTTATCTGACGAAAACGACACGGTCATGATCTATGAAACCGGAAGTACGAGTATGACTGAAACTTCTTCAGATATTCAAGAAGAAGATAGTGAAATTGAACAACTTAATCAAAACTTAAGAACCACGCAGATTGAATTTGTAGACGTAGAATTCAAATTTGTCTCATTGAATGTAAGAATTGAACCAGATAATGAGAATTCTTTTGCCACCCATTCTCTTTTCCCATCATTAACTTTCTCAACTTCTATCTTCCGTCATTAA 1305 44.44 MEWKRGSSIGRGSSATVYLATAFPSGEAFAVKSGELSSSSSLRKEQIFLSGLSSPYIVKYLGFDVSDENRVPMFNLFMEYEPGGSLSDAIRRHGGRLGEGLIRSYTRQILRGLDYLHDNGFAHCDIKSENILVGKEGVKIADLGCAKLVEKVTGKVSFGGTPAFMAPEVARGEEQGFEADVWALGCTLIEMATGKHPWLDRCGDPVSILHIIGFSSELPFFPSWFSEDGKDFLSKCLKRDSKERWTAKKLLEHPFLDEHNSDSITGKQSPANFSNSPNGVLEKGIFDSVQVLESPLNLTQQSSSTSSPAERINNLVRKSFPGEKFPASWTLDEDWISVRSNINNETVDLSDENDTVMIYETGSTSMTETSSDIQEEDSEIEQLNQNLRTTQIEFVDVEFKFVSLNVRIEPDNENSFATHSLFPSLTFSTSIFRH 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4261331 4262635 - Bpe003922.1 Bpe11g00555 110700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00555 434 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00555 434 SMART serkin_6 3 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00555 434 Gene3D Transferase(Phosphotransferase) domain 1 2 318 - -
Bpe11g00555 434 CDD STKc_MAPKKK 2 256 - -
Bpe11g00555 434 Coils Coil 366 393 - -
Bpe11g00555 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bpe11g00555 434 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 1 363 - -
Bpe11g00555 434 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 363 - -
Bpe11g00555 434 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00555 434 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bpe11g00555 434 SUPERFAMILY Protein kinase-like (PK-like) 3 311 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00555 Bpe-Chr11:4261331 Bpe12g00212 Bpe-Chr12:1687300 1.83E-95 dispersed
Bpe06g00192 Bpe-Chr6:6157717 Bpe11g00555 Bpe-Chr11:4261331 2.49E-61 transposed
Bpe07g00419 Bpe-Chr7:4584927 Bpe11g00555 Bpe-Chr11:4261331 1.15E-50 transposed
Bpe09g00461 Bpe-Chr9:12552824 Bpe11g00555 Bpe-Chr11:4261331 1.36E-18 transposed
Bpe11g00924 Bpe-Chr11:6826314 Bpe11g00555 Bpe-Chr11:4261331 1.08E-51 transposed
Bpe11g00555 Bpe-Chr11:4261331 Bpe07g00623 Bpe-Chr7:12947094 1.45E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63568 PF00069 Pkinase 1.30E-56 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00555 K20716 - jre:108983203 412.92