Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00555 | ATGGAGTGGAAAAGAGGGTCTTCCATCGGCCGGGGTTCGTCGGCCACTGTGTACTTAGCGACGGCCTTCCCCTCCGGCGAGGCGTTTGCGGTTAAGTCCGGCGAGCTTTCTTCTTCTTCCTCGCTGCGGAAAGAGCAGATATTTTTGTCCGGATTGAGCTCTCCTTACATTGTCAAATACTTGGGTTTTGATGTTAGTGATGAAAACAGAGTGCCCATGTTCAATCTTTTCATGGAGTACGAACCGGGTGGCTCTCTCTCCGACGCGATTCGCCGACATGGCGGTCGATTGGGCGAGGGACTGATCAGATCCTACACTAGACAGATTTTGCGTGGTTTGGATTATCTTCACGATAATGGGTTTGCGCATTGCGATATAAAGAGTGAAAATATATTGGTCGGTAAAGAAGGGGTGAAAATTGCTGATTTGGGTTGTGCTAAATTGGTGGAGAAAGTCACCGGAAAAGTTTCTTTTGGCGGTACACCGGCTTTCATGGCACCGGAAGTCGCGCGCGGTGAAGAACAAGGATTTGAAGCCGACGTGTGGGCCCTTGGCTGTACTTTGATCGAGATGGCAACAGGTAAACATCCATGGCTGGACAGATGTGGCGATCCGGTATCAATTCTTCACATAATCGGGTTTTCCAGCGAATTGCCATTCTTTCCGAGCTGGTTTTCCGAGGATGGTAAGGATTTTTTGAGCAAGTGTTTGAAGAGAGATTCAAAAGAGCGGTGGACGGCTAAGAAACTGCTTGAACATCCATTTCTTGATGAACACAACTCAGATTCAATTACCGGAAAGCAAAGTCCAGCAAATTTCTCAAATTCTCCCAATGGTGTTTTGGAGAAAGGTATTTTCGATTCAGTCCAAGTATTAGAAAGTCCTCTAAATCTAACCCAGCAAAGCTCCTCGACGAGTTCTCCGGCTGAAAGGATAAACAATTTGGTCAGAAAATCGTTTCCCGGGGAAAAATTTCCGGCCAGTTGGACGTTGGACGAAGATTGGATCTCAGTCAGAAGCAACATCAACAACGAAACAGTCGATTTATCTGACGAAAACGACACGGTCATGATCTATGAAACCGGAAGTACGAGTATGACTGAAACTTCTTCAGATATTCAAGAAGAAGATAGTGAAATTGAACAACTTAATCAAAACTTAAGAACCACGCAGATTGAATTTGTAGACGTAGAATTCAAATTTGTCTCATTGAATGTAAGAATTGAACCAGATAATGAGAATTCTTTTGCCACCCATTCTCTTTTCCCATCATTAACTTTCTCAACTTCTATCTTCCGTCATTAA | 1305 | 44.44 | MEWKRGSSIGRGSSATVYLATAFPSGEAFAVKSGELSSSSSLRKEQIFLSGLSSPYIVKYLGFDVSDENRVPMFNLFMEYEPGGSLSDAIRRHGGRLGEGLIRSYTRQILRGLDYLHDNGFAHCDIKSENILVGKEGVKIADLGCAKLVEKVTGKVSFGGTPAFMAPEVARGEEQGFEADVWALGCTLIEMATGKHPWLDRCGDPVSILHIIGFSSELPFFPSWFSEDGKDFLSKCLKRDSKERWTAKKLLEHPFLDEHNSDSITGKQSPANFSNSPNGVLEKGIFDSVQVLESPLNLTQQSSSTSSPAERINNLVRKSFPGEKFPASWTLDEDWISVRSNINNETVDLSDENDTVMIYETGSTSMTETSSDIQEEDSEIEQLNQNLRTTQIEFVDVEFKFVSLNVRIEPDNENSFATHSLFPSLTFSTSIFRH | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4261331 | 4262635 | - | Bpe003922.1 | Bpe11g00555 | 110700 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00555 | 434 | ProSiteProfiles | Protein kinase domain profile. | 3 | 256 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00555 | 434 | SMART | serkin_6 | 3 | 256 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00555 | 434 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 318 | - | - | |
Bpe11g00555 | 434 | CDD | STKc_MAPKKK | 2 | 256 | - | - | |
Bpe11g00555 | 434 | Coils | Coil | 366 | 393 | - | - | |
Bpe11g00555 | 434 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 121 | 133 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g00555 | 434 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 | 1 | 363 | - | - | |
Bpe11g00555 | 434 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 1 | 363 | - | - | |
Bpe11g00555 | 434 | Pfam | Protein kinase domain | 4 | 256 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00555 | 434 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524 | |
Bpe11g00555 | 434 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 311 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00555 | Bpe-Chr11:4261331 | Bpe12g00212 | Bpe-Chr12:1687300 | 1.83E-95 | dispersed | |
Bpe06g00192 | Bpe-Chr6:6157717 | Bpe11g00555 | Bpe-Chr11:4261331 | 2.49E-61 | transposed | |
Bpe07g00419 | Bpe-Chr7:4584927 | Bpe11g00555 | Bpe-Chr11:4261331 | 1.15E-50 | transposed | |
Bpe09g00461 | Bpe-Chr9:12552824 | Bpe11g00555 | Bpe-Chr11:4261331 | 1.36E-18 | transposed | |
Bpe11g00924 | Bpe-Chr11:6826314 | Bpe11g00555 | Bpe-Chr11:4261331 | 1.08E-51 | transposed | |
Bpe11g00555 | Bpe-Chr11:4261331 | Bpe07g00623 | Bpe-Chr7:12947094 | 1.45E-104 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63568 | PF00069 | Pkinase | 1.30E-56 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00555 | K20716 | - | jre:108983203 | 412.92 |