Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00564 ATGCGGGGACTGTTTCTGACCGCCCAAAACTTCGGCGGCGACCATGCTCAGGTCGTACCCATAACCTTGTTCGTGGCGGTTCTCTGTCTCTGTTTAATCATTGGCCATTTGCTCGAAGAAAATCGATGGGTTAACGAGTCTATCACCGCCATTCTCATTGGGTGTGCCACTGGAACTATTGTCTTGTTTATTAGCAAGGGAAAGAACTCTCACATTCTAACGTTCAATGAAGAGCTCTTCTTTATGTATCTTCTTCCACCTATCATATTCAATGCAGGATTTCAAGTGAAAAAGAAGCAGTTTTTCCACAACTTCTTAACTATCATGCTGTTTGGTGTTATTGGTGTATTCATTTCGTCCCTCATTATTACGGCCGGCACTTGGCGGTTGTTCCCAAAGATAGGATTTCATGGTCTAACAGCAAGAGATTATTTTGTTAAATTAATGATGTTAGAAACGAATAATTTGATGTTGTTATCAGCTCTAGGTACAATTTTTTCATCGACTGACACAGTTTGCACACTTCAGGTTCTTCATCAAGATGAAACTCCATTACTATATAGTCTGGTTTTTGGAGAAGGGGTTGTGAATGATGCAACCTCGGTTGTCCTCTTCAATGCCGTTCAGAAGATTGATGTTACTAGACTGAACAGCCAGACCGCTCTTCGACTTGTCAGAGATTTTTGCTACCTTTTCTCGACGAGCACATGTCTTGGATTAACGTCAGGATTATTGACAGCATATGTTCTTAAAACCTTGTACTTTGGAAGGCAATTTGTCTCTTTTGTTTTTTGCAGACATTCGAGTACTCGGGAACTTGCCATAATGGTTTTAATGGCTTACCTCTCCTACACGTTAGCGGAGCTGCTGGAGTTAAGTGGAATCCTCACAGTTTTCTTCTGTGGGATCATGATGTCGCACTACGCATGGCATAATGTGACGGAAAGTTCAAGAATCACAACCAGGCATGTGCATGTATTTGCAATGATGTCTTTTGTTGCGGAGACATTCATTTTTCTTTACGTGGGAACGGATGCTCTTGACATGGAGAAGTGGAAGATGACCGAGTTGAGTTTTGGGAAATTATTAGGAATCTACAGCACCTTAATCTTCTTAATATTACTTGGACGTGCCGCTTTCGTATTTCCCCTCTCTGCCTTTTCGAATTACTTCAATAGGCATGCGTCGACGACATCTTCAATCTCGTTCAACCACCAGATAGTTATATGGTGGGCTGGTCTTATGAGGGGAGCTGTCTCTATAGCTCTGGCATTCAAACAGTTCACATTTTCCGGTGTTACATCTGATCCGATAAACGCCACGATGATCACCATCACGATTATCATTGTTCTCTTCAGCACCGTGGTGTTTGGATTCTTGACAAAGCCGCTTATAAGCTGTCTACTGCCTCATCATGCACCAAGCAGAACTGAAAGTCTACCAAAGTCTCCGGCAGAGGATATAACACTGCCGTTGTTCTCCATGGAAGAATCAACGGTCATCAATCTCACCCGAGCAAAGGATAGTTTGTCTAGGCTGATTGAGAGGCCGGTTTATACAATCCATTTCTACTGGAGAAAGTTTGATAATGCCTACATGAGGCCAATATTCGGTGGACCCCGGTCTAATCCACCGGAATGTTAG 1644 42.82 MRGLFLTAQNFGGDHAQVVPITLFVAVLCLCLIIGHLLEENRWVNESITAILIGCATGTIVLFISKGKNSHILTFNEELFFMYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISSLIITAGTWRLFPKIGFHGLTARDYFVKLMMLETNNLMLLSALGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKIDVTRLNSQTALRLVRDFCYLFSTSTCLGLTSGLLTAYVLKTLYFGRQFVSFVFCRHSSTRELAIMVLMAYLSYTLAELLELSGILTVFFCGIMMSHYAWHNVTESSRITTRHVHVFAMMSFVAETFIFLYVGTDALDMEKWKMTELSFGKLLGIYSTLIFLILLGRAAFVFPLSAFSNYFNRHASTTSSISFNHQIVIWWAGLMRGAVSIALAFKQFTFSGVTSDPINATMITITIIIVLFSTVVFGFLTKPLISCLLPHHAPSRTESLPKSPAEDITLPLFSMEESTVINLTRAKDSLSRLIERPVYTIHFYWRKFDNAYMRPIFGGPRSNPPEC 547
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4330297 4334034 - Bpe003930.1 Bpe11g00564 110709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00564 547 PANTHER SODIUM/HYDROGEN EXCHANGER 12 543 - -
Bpe11g00564 547 PRINTS Na+/H+ exchanger signature 79 90 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe11g00564 547 PRINTS Na+/H+ exchanger signature 93 107 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe11g00564 547 PRINTS Na+/H+ exchanger signature 163 173 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe11g00564 547 PRINTS Na+/H+ exchanger signature 108 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bpe11g00564 547 PANTHER SODIUM/HYDROGEN EXCHANGER 12 543 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bpe11g00564 547 Pfam Sodium/hydrogen exchanger family 23 465 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bpe11g00564 547 Gene3D - 159 207 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe06g00499 Bpe-Chr6:16214655 Bpe11g00564 Bpe-Chr11:4330297 0 dispersed
Bpe11g00564 Bpe-Chr11:4330297 Bpe02g01889 Bpe-Chr2:20861052 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00564 - - twl:119988520 783.097