Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00565 GATCTTCCGGCAATGTGCAGCTCACGGTGTTTTCTTGTCCTACTTGCTCTGCTTCTGCATTTATCTGTTGCTTTAGTTTCTGCTCAGCGATCTAATGGTACCACTACCTGGCAGACTCTCAGCGGAAATGCTCCCTTAGTTATTGCACGTGGTGGATTCTCAGGCCTATTTCCCGATTCTAGTTTACTTGCCTACAAAGTGGCTGTAGGAATCAGTGTACCTGATGTGGTCTTATGGTGTGATGTGCAATTAACAAAGGATGGGGATGGAATTTGTCTTCCAGATTTGAAACTAGAAAATTCAACTGATATATCTTTCGTTCATGCTAAAGCAAAAAATCAGTACCTCGTGAATGGGGTTAATACTACAGGGTGGTTTTCTATTGATTTCACCCTTGATGACCTTGCAAGTGTTACCATTGATCAAAGGATCTACACTCGAACTAATAAATTTGATGGCAATCCAATGCAAATACTCACTGTTGAAGATGTGGTTACTAATATTAATGTACCCGGATTATGGTTGAATATTCAGCACGATGCCTTCTTCTCACAACACAATCTGAGCATGAGAAGTTTTGTTCTCTCTGTATCTAGATCTGTCGTCCCAAATTACATATCATCTCCTGAGGTGAACTTTCTCAGAAGTATTGTGACAAGATTTAACTCAACCAAGACAAAGCTGGTGTTTCAATTTTTAAATTCAGATGATTTAGAGGTGACAACTAACCAGACCTATGGTTCCCTCTTAAGCAATCTTTCATTTATCAGGACATTTGCATCTGGAATTCTTGTTCCCAAATATTATATATGGCCTGCTGATGCATCTGGTTATTTACTATCTCATACATCTCTTGTTGTTGATGCCCATAAACATGGATTAGAAGTGTTTGCGTCAGAATTCTACAATGACATTCCACTCAACTATAATTACAGTTATGATCCAGTTACAGAGTGTTTGTCTTACATTGATAATGGCGACTTTTCAGTTGATGGTGTGCTAACTGATTTTCCACTAAGTCCATCTTTGACCATAGATTGCCTAGATCAGAAAGATGAAAATAAATTTATTGACTCGTTGTATGTATTGCCAGCAAAACCGTTGGTTATTTCAAAGTTTGGAGCAAGTGGAGACTACCCTGGCTGTACTGACTTGGCATATTCCAAAGCTATTTCAGATGGTGTGGAGATACTTGACTGTCCTGTTCAAATAGCTAAGGATGGGACGCCATTTTGCTTAAGTTCTATAAATCTTATAGATAGTACCACTATTGCCCTTACCGCATATAGCAACTTTTCAAAATCAATTCCAGAAATTAAATCTGGTAGTGGAATTTATGCTTTTGATCTTACATGGTCTCAGATTAGCAATTTGACTCCGGGGATATTAAATCCTTTCGTAGAGTACACTTTATATAGGAATCCCCAGTACAGAAATAGTGGGAAATTTCTAACGCTGTCTAACTTCTTGGCTCTGGCAAAGAACACAAGCTCCCTCTCGGGTGTCTTGCTCAGCATAGAGAATGCGGCTTACCTTGCGCAGCACCAGAATTTGAGTGTGGTTGATGCAGTCATTGATGCGTTGAGTAAAGCAGGTTATGATAATCAGACATCTCAAATAGTTATGATCAGATCTACTAATAGTGCTGTTTTGAAAAAGATTGGGGGGAATAGGAATTATCACTATGTATATGAGGTTGATGAGACCATAAGTGGCGCTCTTGATTCCACTATTGTCGACATCAAGAGTTTTTCTGATGCCGTGGTTGTTGGAAAGTACTCTGTTTTTCCTGAAAATTCTTTATTCCTCACTGGCTCCACAAACGTTGTTGAAAGACTGCATTCGTATAATCTATCCGTCTATGTACAAACTTTTAGCAATGAATTTGTGTCTCAACCATGGGATTTTTTCTCCGATCCGACGGTGGAGATCAACTCCTATTTTATGGGCGCTGATATTGATGGTGTCATCACGGACTTCCCCATGACTGCTGCCCGGTACAAAAGAAATCGATGTTTAAATTTGGGCGATAAAACACCAATCTACATGACCCCGGTTGAGCCTGGTGGTCTGTATAAACTCATCACTGCACCGTACTTGCCTCCAGCAGCAGCTCCTAGTCCAGTCCTGAAAGTTACAGACGTGAACGAGCCGCCATTGCCTTCGGTCGAAATGGGAGCTCCAGCTCCGTCTTCCCCAGCTGGGCTGGGAGCCACCCCACCCCCCCCAAGTGGTCAGCCCAGGCACTCAGCCGTCTTCTTCGGCTATGGCCTTGGACTTCTCCTAGCCGTTCTTGTTCCACTTTGA 2307 41.53 DLPAMCSSRCFLVLLALLLHLSVALVSAQRSNGTTTWQTLSGNAPLVIARGGFSGLFPDSSLLAYKVAVGISVPDVVLWCDVQLTKDGDGICLPDLKLENSTDISFVHAKAKNQYLVNGVNTTGWFSIDFTLDDLASVTIDQRIYTRTNKFDGNPMQILTVEDVVTNINVPGLWLNIQHDAFFSQHNLSMRSFVLSVSRSVVPNYISSPEVNFLRSIVTRFNSTKTKLVFQFLNSDDLEVTTNQTYGSLLSNLSFIRTFASGILVPKYYIWPADASGYLLSHTSLVVDAHKHGLEVFASEFYNDIPLNYNYSYDPVTECLSYIDNGDFSVDGVLTDFPLSPSLTIDCLDQKDENKFIDSLYVLPAKPLVISKFGASGDYPGCTDLAYSKAISDGVEILDCPVQIAKDGTPFCLSSINLIDSTTIALTAYSNFSKSIPEIKSGSGIYAFDLTWSQISNLTPGILNPFVEYTLYRNPQYRNSGKFLTLSNFLALAKNTSSLSGVLLSIENAAYLAQHQNLSVVDAVIDALSKAGYDNQTSQIVMIRSTNSAVLKKIGGNRNYHYVYEVDETISGALDSTIVDIKSFSDAVVVGKYSVFPENSLFLTGSTNVVERLHSYNLSVYVQTFSNEFVSQPWDFFSDPTVEINSYFMGADIDGVITDFPMTAARYKRNRCLNLGDKTPIYMTPVEPGGLYKLITAPYLPPAAAPSPVLKVTDVNEPPLPSVEMGAPAPSSPAGLGATPPPPSGQPRHSAVFFGYGLGLLLAVLVPL 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4341057 4345948 + Bpe003931.1 Bpe11g00565 110710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00565 768 Pfam Glycerophosphoryl diester phosphodiesterase family 374 662 IPR030395 GO:0006629|GO:0008081
Bpe11g00565 768 Pfam Glycerophosphoryl diester phosphodiesterase family 52 339 IPR030395 GO:0006629|GO:0008081
Bpe11g00565 768 MobiDBLite consensus disorder prediction 716 746 - -
Bpe11g00565 768 CDD GDPD_SHV3_repeat_1 45 342 - -
Bpe11g00565 768 SUPERFAMILY PLC-like phosphodiesterases 43 338 IPR017946 GO:0006629|GO:0008081
Bpe11g00565 768 CDD GDPD_SHV3_repeat_2 367 667 - -
Bpe11g00565 768 ProSiteProfiles GP-PDE domain profile. 367 668 IPR030395 GO:0006629|GO:0008081
Bpe11g00565 768 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 16 754 - -
Bpe11g00565 768 SUPERFAMILY PLC-like phosphodiesterases 366 667 IPR017946 GO:0006629|GO:0008081
Bpe11g00565 768 ProSiteProfiles GP-PDE domain profile. 45 345 IPR030395 GO:0006629|GO:0008081
Bpe11g00565 768 Gene3D Phosphatidylinositol (PI) phosphodiesterase 365 668 IPR017946 GO:0006629|GO:0008081
Bpe11g00565 768 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 341 IPR017946 GO:0006629|GO:0008081
Bpe11g00565 768 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 16 754 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01107 Bpe11g00565 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00657 Bpe-Chr8:6736548 Bpe11g00565 Bpe-Chr11:4341057 0 dispersed
Bpe11g00565 Bpe-Chr11:4341057 Bpe11g00567 Bpe-Chr11:4353798 0 proximal
Bpe11g00565 Bpe-Chr11:4341057 Bpe08g01107 Bpe-Chr8:13111403 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00565 - - jre:108984850 929.858