Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00567 GATCTTCCGGCAATGTGTAGCTCACGCTGTTTTCTCGTCCTACTCGCTCTGCTTCTGCATTTGCCTATTGCTTTAGTTTCTGGTCAAGGATCTAATGATACCCGTGCCTGGCAGACTCTCAGCGGAAATGCTCCATTAGTTATTGCACGTGGTGGATTCTCGGGACTATATCCTGATTCTAGTTTATTGGCTTACGCTTCTGTGGCAACCAGTGTACCTGATGTGGTCTTATGGTGTGATGTACAATTAACTAAGGATGGGGCTGGAATTTGTCTTCCAGATTTGAAACTAGAAAATTCAACTGATATATCGTTCGTTTATGCTAACGCAAAAAATCAGTACCTCGTGAATGGGGTTAATACTACAGGATGGTTTTCTATCGATTTCACTCTCAATGACCTTGCAAGTGTTACCCTTGATCAAGGGATCTACTCTCGAACTAACAAATTTGATGGCAATCCAATGCAAATACTCACTGTTGAAGATGTGGTTAATAATATTAGTGTACCCGGATTGTGGTTGAATATTCAGCACGATGCCTTCTTCTCACAACACAATCTGAGCACGAGAAATTATGTTCTCTCTGTATCTAGAACTGTCGTCCTAAATTACATATCATCTCCTGAGGTGAACTTTCTCAGAAGTATTGTGACAAGATTTAACTCAACCAAGACAAAGCTGGTGTTTCGATTTTTAAATTCAGATGATTTAGAGGTGACAACTAACCAGACCTATGGTTCCCTCGTAAGCAATCTTTCATTTATCAAGACATTTGCATCTGGAATTCTTGTTCCCAAATATTATATATGGCCTGCTGATGCATCTGGTTATTTACTATCTCATACATCTCTTGTTGTCAATGCCCACAAACACGGATTAGAAGTGTTTGCGTCAGAATTCTACAATGACATTCCACTCAGCTATAATTACAGTTATGATCCAGTTACAGAATACTTGTCTTACATCGACAATGGCGACTTTTCAGTTGATGGTGTGCTAACTGATTTCCCACTAAGTCCATCTCTAACCATAGATTGCCTAGATCAGACAGATGAAAATAAATTTATTGACCCATTGTATGTATTGCCAGCAAAACCGTTGGTTATTTCAAAGTTTGGAGCGAGTGGAGACTACCCTGGCTGTACTGACTTGGCATATTCCAAAGCTATTTCAGATGGTGTGGAGATACTTGACTGTCCTGTTCAAATAGCTAAGGATGGGACGCCATTTTGCTTAAGTTCTATAAATCTTATAGATAGTACCACTATTGCCCAAACCGCTTATAGCAGCTTTTCAAAAACAATTCCAGAAATTAAATCTGGTAGTGGAATTTATGCTTTTGATCTTACATGGTCTCAGATTAGCAATTTGACTCCGGCGATATTAAATCCTTTTTCAAAGTACACTTTATATAGGAATCCCCTGTACAGAAATAGTGGGAAATTTCGAACGCTGTCTGACTTCTTGGCTCTGGCAAAGAACACAAGCTCCCTCTCGGGTGTCTTGCTCAGCATAGAGAATGCGGCTTACCTTGCGGAGCACCAGGATTTGAGTGTGGTTGATGCAGTCATTGATGCGTTGAGTAAAGCAGGTTATGATAATCAGACATCTCAAATAGTTATGATCAGATCTACTAATAGTGCTGTTTTGAAAAAGATTGGGGGGAATAGGAATTATCACTATGTATATGAGGTTGATGAGACCATAAGTGGCGCTCTTGATTCCACTATTGTCGACATCAAGAGTTTCTCTGATGCCGTGGTCGTTGGAAAGTACTCTGTCTTTACTCAAAATTCTTTATTCCTCACTGCCTCCACAAACGTTGTCGAAAGACTCCATTCGTATAATCTATCCGTTTATGTACAAACTTTTAGCAATGAATTTGTGTCTCAACCATGGGATTTTTTCTCCGATCCGACGGTGGAGATCAACTCCTTTTTTATGGGCGCTGATATTGACGGTGTCATCACGGACTTCCCCATGACCGCCGCCCGGTACAAAAGAAATCGATGTTTAAATTTGGGCGATAAAACACCAATCTACATGACCACGGTTGAGCCTGGTGGTCTGTATGAACTCATCACTCCACCGTACTTGCCTCCAGCAGCAGCTCCTAGTCCAGTCCTGAAAGTGTCAGACGTGGACGAGCCGCCGTTGCCTTCGGTTGAAGCGGAAGACAAAGATGTTGAATAG 2193 41.22 DLPAMCSSRCFLVLLALLLHLPIALVSGQGSNDTRAWQTLSGNAPLVIARGGFSGLYPDSSLLAYASVATSVPDVVLWCDVQLTKDGAGICLPDLKLENSTDISFVYANAKNQYLVNGVNTTGWFSIDFTLNDLASVTLDQGIYSRTNKFDGNPMQILTVEDVVNNISVPGLWLNIQHDAFFSQHNLSTRNYVLSVSRTVVLNYISSPEVNFLRSIVTRFNSTKTKLVFRFLNSDDLEVTTNQTYGSLVSNLSFIKTFASGILVPKYYIWPADASGYLLSHTSLVVNAHKHGLEVFASEFYNDIPLSYNYSYDPVTEYLSYIDNGDFSVDGVLTDFPLSPSLTIDCLDQTDENKFIDPLYVLPAKPLVISKFGASGDYPGCTDLAYSKAISDGVEILDCPVQIAKDGTPFCLSSINLIDSTTIAQTAYSSFSKTIPEIKSGSGIYAFDLTWSQISNLTPAILNPFSKYTLYRNPLYRNSGKFRTLSDFLALAKNTSSLSGVLLSIENAAYLAEHQDLSVVDAVIDALSKAGYDNQTSQIVMIRSTNSAVLKKIGGNRNYHYVYEVDETISGALDSTIVDIKSFSDAVVVGKYSVFTQNSLFLTASTNVVERLHSYNLSVYVQTFSNEFVSQPWDFFSDPTVEINSFFMGADIDGVITDFPMTAARYKRNRCLNLGDKTPIYMTTVEPGGLYELITPPYLPPAAAPSPVLKVSDVDEPPLPSVEAEDKDVE 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4353798 4358182 + Bpe003933.1 Bpe11g00567 110712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00567 730 ProSiteProfiles GP-PDE domain profile. 45 344 IPR030395 GO:0006629|GO:0008081
Bpe11g00567 730 Gene3D Phosphatidylinositol (PI) phosphodiesterase 364 667 IPR017946 GO:0006629|GO:0008081
Bpe11g00567 730 Gene3D Phosphatidylinositol (PI) phosphodiesterase 43 340 IPR017946 GO:0006629|GO:0008081
Bpe11g00567 730 MobiDBLite consensus disorder prediction 709 730 - -
Bpe11g00567 730 CDD GDPD_SHV3_repeat_1 45 341 - -
Bpe11g00567 730 Pfam Glycerophosphoryl diester phosphodiesterase family 52 338 IPR030395 GO:0006629|GO:0008081
Bpe11g00567 730 Pfam Glycerophosphoryl diester phosphodiesterase family 373 661 IPR030395 GO:0006629|GO:0008081
Bpe11g00567 730 ProSiteProfiles GP-PDE domain profile. 366 667 IPR030395 GO:0006629|GO:0008081
Bpe11g00567 730 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 17 725 - -
Bpe11g00567 730 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 17 725 - -
Bpe11g00567 730 SUPERFAMILY PLC-like phosphodiesterases 43 337 IPR017946 GO:0006629|GO:0008081
Bpe11g00567 730 CDD GDPD_SHV3_repeat_2 366 666 - -
Bpe11g00567 730 SUPERFAMILY PLC-like phosphodiesterases 365 666 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01107 Bpe-Chr8:13111403 Bpe11g00567 Bpe-Chr11:4353798 0 dispersed
Bpe11g00565 Bpe-Chr11:4341057 Bpe11g00567 Bpe-Chr11:4353798 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00567 - - jre:108984858 934.095