Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00578 ATGGGTTTAAGGGGTTTCAATGGTGCCTTTATGTTTTTCTTGGTAGTTTTTTGTGGAATTCTAGTAGGTTTCGCGAAACACAATGTTCATAGTGAGAAGTATATAAGTTGGGATGATTTGAAGGTAGATAAAATGGAGAGAACGAGTTCAGCCTACCAGAATAATCAAAGTCGAGTTATCGTTGTCGATAAGCATGGCAGAGGAGATTCTGTTACTGTTCAAGGAGCCGTTGATATGGTTCCTGAGCAAAATACAAAAAGAGTAAAAATTTACATTCGTCCTGGAATTTACAGAGAGAAGGTTCTTGTTCCAAGAAACAAACCATATATTTCCTTCATAGGCGATGAGAATCAAGCTTCCAACACTGTAATTTCATGGAACAACAAAGCATCTGACAAAGACGAACATGGGATCAATCTAGGAACATACAGATCAGCATCTGTGTCGATCGAATCAGATTACTTTTGCGCAACGGGGATTACGTTTCAGAACCCAATAAAGATAGAACCCAAAGGAGTTGGTAGGCAAGCAGTTGCACTGAGAATAGCAGGAGACAAAGCAATGTTCTATAAAGTAAGAATTGTGGGAGATCAAGACACTCTTCTAGATGAATCTGGAACTCACTATTTCTACAAATGTCACATTCAAGGAAGTGTAGATTTCATATTTGGAAGATCTAAATCGCTATACGAGCGTTGCATGCTTAGATTGACAGCGAAGAACTACGGATCCATCGCAGCTCATCACAGGGATTCATCAGAGGAAGATACTGGATTCTCCTTCGTTGGCTGCAGAATCGAAGGAACAGGCAATGTTCTTCTGGGAAGAGCTTGGGGCAATTATTCTCGAGCAATCTATTCTTACTGTTCGATGGCAGACATTATAAACCCTCAAGGCTGGAGCGACTGGAACTACCCATCAAGACAAAGGACTGCTGTATTTGGAGAGTACAAATGCAGAGGCAAAGGAGCTAATACACGTGGGAGAGTGTCGTGGTCCAAGTCTTTCGACAGAAGGGAAGCCGAGCCTTTTCTGAACTTGAAGTTCATCAATGGAGACCAGTGGCTCAGACTA 1074 41.62 MGLRGFNGAFMFFLVVFCGILVGFAKHNVHSEKYISWDDLKVDKMERTSSAYQNNQSRVIVVDKHGRGDSVTVQGAVDMVPEQNTKRVKIYIRPGIYREKVLVPRNKPYISFIGDENQASNTVISWNNKASDKDEHGINLGTYRSASVSIESDYFCATGITFQNPIKIEPKGVGRQAVALRIAGDKAMFYKVRIVGDQDTLLDESGTHYFYKCHIQGSVDFIFGRSKSLYERCMLRLTAKNYGSIAAHHRDSSEEDTGFSFVGCRIEGTGNVLLGRAWGNYSRAIYSYCSMADIINPQGWSDWNYPSRQRTAVFGEYKCRGKGANTRGRVSWSKSFDRREAEPFLNLKFINGDQWLRL 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4417256 4418712 + Bpe024764 Bpe11g00578 110723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00578 358 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 13 358 - -
Bpe11g00578 358 Gene3D - 58 358 IPR012334 -
Bpe11g00578 358 PANTHER PECTINESTERASE QRT1 13 358 - -
Bpe11g00578 358 Pfam Pectinesterase 60 353 IPR000070 GO:0030599|GO:0042545
Bpe11g00578 358 SUPERFAMILY Pectin lyase-like 57 356 IPR011050 -
Bpe11g00578 358 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01099 Bpe11g00578 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe09g00075 Bpe-Chr9:528645 Bpe11g00578 Bpe-Chr11:4417256 8.81E-86 dispersed
Bpe11g00578 Bpe-Chr11:4417256 Bpe13g00699 Bpe-Chr13:13605771 7.52E-74 dispersed
Bpe11g00578 Bpe-Chr11:4417256 Bpe08g01099 Bpe-Chr8:13037297 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00578 K01051 - jre:108983471 517.694